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Epilepsy-associated digenic variants affecting an actin/mitochondria/glutamate pathway promote seizure susceptibility
Shenzhao Lu, Mengqi Ma, Shabab B. Hannan, Mingxi Deng, Hu Chen, Zhijian Yu, Lindsey D. Goodman, Haein Kim, Yun Zhao, Sandeep Kumar Dubey, Wen-Wen Lin, Xueyang Pan, Debdeep Dutta, Vishnu Anand Cuddapah, Jill A. Rosenfeld, Xi Luo, Zhandong Liu, Joshua M. Shulman, Hugo J. Bellen
Shenzhao Lu, Mengqi Ma, Shabab B. Hannan, Mingxi Deng, Hu Chen, Zhijian Yu, Lindsey D. Goodman, Haein Kim, Yun Zhao, Sandeep Kumar Dubey, Wen-Wen Lin, Xueyang Pan, Debdeep Dutta, Vishnu Anand Cuddapah, Jill A. Rosenfeld, Xi Luo, Zhandong Liu, Joshua M. Shulman, Hugo J. Bellen
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Research Article Development Genetics Neuroscience

Epilepsy-associated digenic variants affecting an actin/mitochondria/glutamate pathway promote seizure susceptibility

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Abstract

Epilepsy affects approximately 50 million people worldwide, yet more than half of individuals with a presumed genetic cause still lack a molecular diagnosis despite the identification of over 1,000 monogenic epilepsy genes. This diagnostic gap is unlikely to be resolved by improved variant detection alone, suggesting that variants affecting the same biological pathway may combine to cause disease. By studying epilepsy-associated actin regulatory genes, we identified a conserved actin/mitochondria/glutamate (AMG) pathway. We demonstrate that reduced actin polymerization promoted DRP1-mediated mitochondrial fission, increased ROS levels, and enhanced glutamatergic transmission, leading to seizures. The glial innate immune pathway, a recently recognized contributor to epilepsy, is activated when the AMG pathway is affected. Reducing mitochondrial fission with the mitochondria division inhibitor (Mdivi-1), or suppressing ROS with N-acetyl-l-cysteine amide (NACA), significantly alleviated seizures. Importantly, digenic heterozygous loss-of-function variants in AMG pathway genes combined to cause seizures, and individuals with epilepsy of unknown etiology showed an increased burden of such variants when compared with the controls. Modeling patient-specific digenic combinations in Drosophila confirmed that many combinations promote seizure susceptibility. Together, these findings establish the AMG pathway as a mechanistic framework for identifying digenic etiologies in epilepsy and highlight potential therapeutic targets.

Authors

Shenzhao Lu, Mengqi Ma, Shabab B. Hannan, Mingxi Deng, Hu Chen, Zhijian Yu, Lindsey D. Goodman, Haein Kim, Yun Zhao, Sandeep Kumar Dubey, Wen-Wen Lin, Xueyang Pan, Debdeep Dutta, Vishnu Anand Cuddapah, Jill A. Rosenfeld, Xi Luo, Zhandong Liu, Joshua M. Shulman, Hugo J. Bellen

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Figure 7

Knockdown of TIAM1 in mammalian cells leads to reduced actin polymerization and increased mitochondrial fission.

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Knockdown of TIAM1 in mammalian cells leads to reduced actin polymerizat...
(A) Representative image of actin filaments in Daoy cells transfected with either a negative control siRNA or an siRNA targeting TIAM1 (TIAM1 siRNA). Red, phalloidin; blue, DAPI. (B) The percentage of cells with long and short actin filaments was quantified (n = 3 with 190–192 cells for each group). (C) Representative images of the ATP5A-labeled mitochondria in Daoy cells. (D) Quantitative analysis of the mitochondrial phenotype in each cell (n = 15–21). Fisher’s exact test. (E and F) Quantitative analysis of the number of mitochondria (E) and mean mitochondria length (F) in the region of interest (ROI) of each Daoy cell (n = 15). (G) Western blots of Daoy cells transfected with control siRNA or TIAM1 siRNA and treated with or without NACA (750 μM, 24 hours). (H) Quantifications of protein levels indicate a significant increase in p-DRP1 (S616) and total DRP1 protein levels in the TIAM1 siRNA group (n = 4–7). (I) The elevated p-DRP1 (S616)/total DRP1 ratio in TIAM1 siRNA cells was significantly rescued by NACA treatment (n = 4). Data are presented as the mean ± SEM. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001, by unpaired 2 tailed t test with Welch’s correction for unequal variances (B, E, F, H, and I).

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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