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LSD1-mediated demethylation of the DNA damage response factor ATM promotes senescence and organ aging
Yingying Zhang, Chen Yu, Xiaoqin Zhang, Linda Xiaoyan Li, Alice Shasha Cheng, Xiaogang Li
Yingying Zhang, Chen Yu, Xiaoqin Zhang, Linda Xiaoyan Li, Alice Shasha Cheng, Xiaogang Li
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Research Article Aging Cell biology

LSD1-mediated demethylation of the DNA damage response factor ATM promotes senescence and organ aging

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Abstract

Aging occurs heterogeneously across organs, leading to progressive tissue dysfunction. Cellular senescence is a stress response triggered by age-associated insults, yet the mechanisms regulating senescence and organ aging remain incompletely understood. Here, we defined a role for lysine-specific demethylase 1 (LSD1) in DNA damage–mediated senescence and organ aging. LSD1 was upregulated in aged organs and senescent cells. In response to natural aging or ionizing radiation–induced DNA damage, LSD1 interacted with and demethylated ATM at lysine 3,016, as confirmed using a newly generated ATM-K3016me antibody. This modification sustained ATM phosphorylation, amplified DNA damage signaling, and delayed checkpoint recovery, promoting senescence and organ aging. Inhibition of LSD1 accelerated ATM dephosphorylation via WIP1, enhanced DNA repair, reduced senescence and DNA damage, and prevented irradiation-induced hair graying. Elimination of senescent cells with senolytics reduced LSD1 protein in aged organs, indicating a feedback loop between LSD1 and senescence. Mechanistically, LSD1 underwent autophagosome-lysosome degradation through interaction with LC3 and Beclin1, and autophagy impairment during DNA damage contributed to LSD1 accumulation in senescent cells. This study revealed LSD1 as a key regulator of DNA damage–induced senescence and organ aging and suggested that targeting LSD1 may attenuate senescence, delay organ aging, and prevent hair graying.

Authors

Yingying Zhang, Chen Yu, Xiaoqin Zhang, Linda Xiaoyan Li, Alice Shasha Cheng, Xiaogang Li

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Figure 4

Increased LSD1 is involved in DNA damage–mediated senescence and DNA damage repair.

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Increased LSD1 is involved in DNA damage–mediated senescence and DNA dam...
(A) Western blot analysis of the levels of LSD1, phospho-ATM, and total of ATM, γH2AX. p16 and p21 in mouse 3T3 cells treated with either 5Gy- IR or 20Gy-IR at indicated time points. (B) Western blot analysis of the levels of GFP-LSD1, LSD1, phospho-ATM, and total of ATM, γH2AX, p16, and p21 in GFP-LSD1 and GFP-empty vector transfected 3T3 cells treated with IR (5 Gy) at indicated time points. (C) Western blot analysis of the levels of LSD1, phospho-ATM and total of ATM, γH2AX, p16, and p21 in Lsd1 knockdown (siLSD1) 3T3 cells treated with IR (20 Gy) compared with the control siRNA (siNC) at indicated time points. Representative data from 3 independent experiments are shown. (D) Representative images and statistical graph of comet assay in Lsd1 knockdown (siLSD1) 3T3 cells treated with IR at indicated time points. Error bars represent the SEM. Data were analyzed from 10 images in 3 independent experiments. Scale bar: 50 μm. ns, no significance, *P < 0.05, **P < 0.01; 1-way ANOVA.

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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