The persistence of latently infected, resting CD4+ T cells is considered to be a major obstacle in preventing the eradication of HIV-1 even in patients who have received effective antiviral therapy for an average duration of 5 years. Although previous studies have suggested that the latent HIV reservoir in the resting CD4+ T cell compartment is virologically quiescent in the absence of activating stimuli, evidence has been mounting to suggest that low levels of ongoing viral replication persist and in turn, prolong the overall half-life of HIV in patients receiving antiviral therapy. Here, we demonstrate the persistence of replication-competent virus in CD4+ T cells in a cohort of patients who had received uninterrupted antiviral therapy for up to 9.1 years that rendered them consistently aviremic throughout that time. Surprisingly, substantially higher levels of HIV proviral DNA were found in activated CD4+ T cells when compared with resting CD4+ T cells in the majority of patients we studied. Phylogenetic analyses revealed evidence for cross infection between the resting and activated CD4+ T cell compartments, suggesting that ongoing reactivation of latently infected, resting CD4+ T cells and spread of virus by activated CD4+ T cells may occur in these patients. Such events may allow continual replenishment of the CD4+ T cell reservoir and resetting of the half-life of the latently infected, resting CD4+ T cells despite prolonged periods of aviremia.
Tae-Wook Chun, David C. Nickle, J. Shawn Justement, Danielle Large, Alice Semerjian, Marcel E. Curlin, M. Angeline O’Shea, Claire W. Hallahan, Marybeth Daucher, Douglas J. Ward, Susan Moir, James I. Mullins, Colin Kovacs, Anthony S. Fauci
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Journal of virology | 2011 |
Clonotype and repertoire changes drive the functional improvement of HIV-specific CD8 T cell populations under conditions of limited antigenic stimulation
L Janbazian, DA Price, G Canderan, A Filali-Mouhim, TE Asher, DR Ambrozak, P Scheinberg, MR Boulassel, JP Routy, RA Koup, DC Douek, RP Sekaly, L Trautmann |
Journal of immunology (Baltimore, Md. : 1950) | 2011 |
Histone deacetylase inhibitors for purging HIV-1 from the latent reservoir
S Matalon, TA Rasmussen, CA Dinarello |
Molecular Medicine | 2011 |
HIV reservoirs and latency models
MJ Pace, L Agosto, EH Graf, U O'Doherty |
Virology | 2011 |
Histone Deacetylase Inhibitors for Treating a Spectrum of Diseases Not Related to Cancer
CA Dinarello, G Fossati, P Mascagni |
Molecular Medicine | 2011 |
CD4+ T cells spontaneously producing human immunodeficiency virus type I in breast milk from women with or without antiretroviral drugs
D Valea, E Tuaillon, YA Tabaa, F Rouet, PA Rubbo, N Meda, V Foulongne, K Bollore, N Nagot, PV de Perre, JP Vendrell |
Retrovirology | 2011 |
The molecular biology of HIV latency: breaking and restoring the Tat-dependent transcriptional circuit
J Karn |
Current Opinion in HIV and AIDS | 2011 |
Control of HIV Latency by Epigenetic and Non-Epigenetic Mechanisms
U Mbonye, J Karn |
Current HIV research | 2011 |
HIV Latency
RF Siliciano, WC Greene |
Cold Spring Harbor Perspectives in Medicine | 2011 |
Intensification of Antiretroviral Therapy with a CCR5 Antagonist in Patients with Chronic HIV-1 Infection: Effect on T Cells Latently Infected
C Gutiérrez, L Díaz, A Vallejo, B Hernández-Novoa, M Abad, N Madrid, V Dahl, R Rubio, AM Moreno, F Dronda, JL Casado, E Navas, MJ Pérez-Elías, J Zamora, S Palmer, E Muñoz, MÁ Muñoz-Fernández, S Moreno |
PloS one | 2011 |
Deep Molecular Characterization of HIV-1 Dynamics under Suppressive HAART
MJ Buzón, FM Codoñer, SD Frost, C Pou, MC Puertas, M Massanella, J Dalmau, JM Llibre, M Stevenson, J Blanco, B Clotet, R Paredes, J Martinez-Picado |
PLoS pathogens | 2011 |
Relationship Between Residual Plasma Viremia and the Size of HIV Proviral DNA Reservoirs in Infected Individuals Receiving Effective Antiretroviral Therapy
TW Chun, D Murray, JS Justement, CW Hallahan, S Moir, C Kovacs, AS Fauci |
The Journal of Infectious Diseases | 2011 |
Epigenetic Silencing of HIV-1 by the Histone H3 Lysine 27 Methyltransferase Enhancer of Zeste 2
J Friedman, WK Cho, CK Chu, KS Keedy, NM Archin, DM Margolis, J Karn |
Journal of virology | 2011 |
Management of HIV infection in treatment-naive patients: A review of the most current recommendations
SD Boyd |
American journal of health-system pharmacy : AJHP : official journal of the American Society of Health-System Pharmacists | 2011 |
Targeting viral reservoirs: ability of antiretroviral therapy to stop viral replication:
F Maldarelli |
Current Opinion in HIV and AIDS | 2011 |
How to escape treatment
SG Deeks |
Nature | 2011 |
Viral decay kinetics in the highly active antiretroviral therapy-treated rhesus macaque model of AIDS
JD Deere, J Higgins, E Cannavo, A Villalobos, L Adamson, E Fromentin, RF Schinazi, PA Luciw, TW North |
PloS one | 2010 |
The Histone Deacetylase Inhibitor ITF2357 Decreases Surface CXCR4 and CCR5 Expression on CD4+ T-Cells and Monocytes and is Superior to Valproic Acid for Latent HIV-1 Expression in Vitro
S Matalon, BE Palmer, MF Nold, A Furlan, A Kassu, G Fossati, P Mascagni, CA Dinarello |
Journal of acquired immune deficiency syndromes (1999) | 2010 |
Evolution and Recombination of Genes Encoding HIV-1 Drug Resistance and Tropism during Antiretroviral Therapy
B Shi, C Kitchen, B Weiser, D Mayers, B Foley, K Kemal, K Anastos, M Suchard, M Parker, C Brunner, H Burger |
Virology | 2010 |
Establishment of HIV-1 latency in resting CD4+ T cells depends on chemokine-induced changes in the actin cytoskeleton
PU Cameron, S Saleh, G Sallmann, A Solomon, F Wightman, VA Evans, G Boucher, EK Haddad, RP Sekaly, AN Harman, JL Anderson, KL Jones, J Mak, AL Cunningham, A Jaworowski, SR Lewin |
Proceedings of the National Academy of Sciences | 2010 |
Rebound of plasma viremia following cessation of antiretroviral therapy despite profoundly low levels of HIV reservoir: implications for eradication
TW Chun, JS Justement, D Murray, CW Hallahan, J Maenza, AC Collier, PM Sheth, R Kaul, M Ostrowski, S Moir, C Kovacs, AS Fauci |
AIDS | 2010 |
Short-course raltegravir intensification does not reduce persistent low-level viremia in patients with HIV-1 suppression during receipt of combination antiretroviral therapy
D McMahon, J Jones, A Wiegand, SJ Gange, M Kearney, S Palmer, S McNulty, JA Metcalf, E Acosta, C Rehm, JM Coffin, JW Mellors, F Maldarelli |
Clinical Infectious Diseases | 2010 |
HIV-1 replication and immune dynamics are affected by raltegravir intensification of HAART-suppressed subjects
MJ Buzón, M Massanella, JM Llibre, A Esteve, V Dahl, MC Puertas, JM Gatell, P Domingo, R Paredes, M Sharkey, S Palmer, M Stevenson, B Clotet, J Blanco, J Martinez-Picado |
Nature Medicine | 2010 |
Effect of Raltegravir-containing Intensification on HIV Burden and T Cell Activation in Multiple Gut Sites of HIV+ Adults on Suppressive Antiretroviral Therapy
SA Yukl, AK Shergill, K McQuaid, S Gianella, H Lampiris, CB Hare, M Pandori, E Sinclair, HF Günthard, M Fischer, JK Wong, DV Havlir |
AIDS | 2010 |
HIV Load Testing with Small Samples of Whole Blood
K Steinmetzer, T Seidel, A Stallmach, E Ermantraut |
Journal of clinical microbiology | 2010 |
Stage-Dependent Inhibition of HIV-1 Replication by Antiretroviral Drugs in Cell Culture
DA Donahue, RD Sloan, BD Kuhl, T Bar-Magen, SM Schader, MA Wainberg |
Antimicrobial agents and chemotherapy | 2010 |
Varied sensitivity to therapy of HIV-1 strains in CD4+ lymphocyte sub-populations upon ART initiation
EJ Heeregrave, MJ Geels, E Baan, RM van der Sluis, WA Paxton, G Pollakis |
AIDS Research and Therapy | 2010 |
Workshop report: “Towards a Cure: HIV Reservoirs and Strategies to Control Them”
Jefferys RJ |
Journal of the International AIDS Society | 2010 |
Pulmonary surfactant: an immunological perspective
ZC Chroneos, Z Sever-Chroneos, VL Shepherd |
Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology | 2009 |
Modeling HIV persistence, the latent reservoir, and viral blips
L Rong, AS Perelson |
Journal of Theoretical Biology | 2009 |
Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses
TA Wagner, NH Tobin, JL McKernan, M Xu, AJ Melvin, KM Mohan, GH Learn, JI Mullins, LM Frenkel |
AIDS | 2009 |
Analysis of Human Immunodeficiency Virus Type 1 Viremia and Provirus in Resting CD4 + T Cells Reveals a Novel Source of Residual Viremia in Patients on Antiretroviral Therapy
TP Brennan, JO Woods, AR Sedaghat, JD Siliciano, RF Siliciano, CO Wilke |
Journal of virology | 2009 |
Understanding HIV-1 latency provides clues for the eradication of long-term reservoirs
M Coiras, MR López-Huertas, M Pérez-Olmeda, J Alcamí |
Nature Reviews Microbiology | 2009 |
Molecular control of HIV-1 postintegration latency: implications for the development of new therapeutic strategies
L Colin, CV Lint |
Retrovirology | 2009 |
Cellular levels of HIV unspliced RNA from patients on combination antiretroviral therapy with undetectable plasma viremia predict the therapy outcome
AO Pasternak, S Jurriaans, M Bakker, JM Prins, B Berkhout, VV Lukashov |
PloS one | 2009 |
Modeling latently infected cell activation: viral and latent reservoir persistence, and viral blips in HIV-infected patients on potent therapy
L Rong, AS Perelson |
PLoS computational biology | 2009 |
V3 loop sequence space analysis suggests different evolutionary patterns of CCR5- and CXCR4-tropic HIV
K Bozek, A Thielen, S Sierra, R Kaiser, T Lengauer |
PloS one | 2009 |
HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation
N Chomont, M El-Far, P Ancuta, L Trautmann, FA Procopio, B Yassine-Diab, G Boucher, MR Boulassel, G Ghattas, JM Brenchley, TW Schacker, BJ Hill, DC Douek, JP Routy, EK Haddad, RP Sékaly |
Nature Medicine | 2009 |
Role of viral replication, antiretroviral therapy, and immunodeficiency in HIV-associated atherosclerosis
PY Hsue, PW Hunt, A Schnell, SC Kalapus, R Hoh, P Ganz, JN Martin, SG Deeks |
AIDS | 2009 |
Can the viral reservoir of latently infected CD4+ T cells be eradicated with antiretroviral HIV drugs?
RJ Smith, BD Aggarwala |
Journal of Mathematical Biology | 2009 |
A Simian Immunodeficiency Virus-Infected Macaque Model To Study Viral Reservoirs That Persist during Highly Active Antiretroviral Therapy
JB Dinoso, SA Rabi, JN Blankson, L Gama, JL Mankowski, RF Siliciano, MC Zink, JE Clements |
Journal of virology | 2009 |
Development and Assessment of a Multiplex Real-Time PCR Assay for Quantification of Human Immunodeficiency Virus Type 1 DNA
A Beloukas, D Paraskevis, C Haida, V Sypsa, A Hatzakis |
Journal of clinical microbiology | 2009 |
Resting regulatory CD4 T cells: a site of HIV persistence in patients on long-term effective antiretroviral therapy
TA Tran, MG de Herve, H Hendel-Chavez, B Dembele, EL Névot, K Abbed, C Pallier, C Goujard, J Gasnault, JF Delfraissy, AM Balazuc, Y Taoufik |
PloS one | 2008 |
Low-level HIV-1 replication and the dynamics of the resting CD4+T cell reservoir for HIV-1 in the setting of HAART
AR Sedaghat, RF Siliciano, CO Wilke |
BMC Infectious Diseases | 2008 |
HLA class I-restricted T-cell responses may contribute to the control of human immunodeficiency virus infection, but such responses are not always necessary for long-term virus control
B Emu, E Sinclair, H Hatano, A Ferre, B Shacklett, JN Martin, JM McCune, SG Deeks |
Journal of virology | 2008 |
Highly Sensitive Methods Based on Seminested Real-Time Reverse Transcription-PCR for Quantitation of Human Immunodeficiency Virus Type 1 Unspliced and Multiply Spliced RNA and Proviral DNA
AO Pasternak, KW Adema, M Bakker, S Jurriaans, B Berkhout, M Cornelissen, VV Lukashov |
Journal of clinical microbiology | 2008 |
Cellular Reservoirs of HIV-1 and their Role in Viral Persistence
Alexaki A, Liu Y, Wigdahl B |
Current HIV research | 2008 |
Predictors of disease progression in HIV infection: a review
SE Langford, J Ananworanich, DA Cooper |
AIDS Research and Therapy | 2007 |
Pathogenesis of HIV in the gastrointestinal tract
S Dandekar |
Current HIV/AIDS Reports | 2007 |
Limits on Replenishment of the Resting CD4+ T Cell Reservoir for HIV in Patients on HAART
AR Sedaghat, JD Siliciano, TP Brennan, CO Wilke, RF Siliciano, S Ross |
PLoS pathogens | 2007 |
Phylodynamics of HIV-1 in lymphoid and non-lymphoid tissues reveals a central role for the thymus in emergence of CXCR4-using quasispecies
M Salemi, BR Burkhardt, RR Gray, G Ghaffari, JW Sleasman, MM Goodenow |
PloS one | 2007 |
Transient viremia, plasma viral load, and reservoir replenishment in HIV-infected patients on antiretroviral therapy
LE Jones, AS Perelson |
Journal of acquired immune deficiency syndromes (1999) | 2007 |
Unintegrated HIV-1 provides an inducible and functional reservoir in untreated and highly active antiretroviral therapy-treated patients
G Petitjean, YA Tabaa, E Tuaillon, C Mettling, V Baillat, J Reynes, M Segondy, JP Vendrell |
Retrovirology | 2007 |
Productive Human Immunodeficiency Virus Type 1 Infection in Peripheral Blood Predominantly Takes Place in CD4/CD8 Double-Negative T Lymphocytes
P Kaiser, B Joos, B Niederöst, R Weber, HF Günthard, M Fischer |
Journal of virology | 2007 |
ART Suppresses Plasma HIV-1 RNA to a Stable Set Point Predicted by Pretherapy Viremia
F Maldarelli, S Palmer, MS King, A Wiegand, MA Polis, JA Mican, JA Kovacs, RT Davey, D Rock-Kress, R Dewar, S Liu, JA Metcalf, C Rehm, SC Brun, GJ Hanna, DJ Kempf, JM Coffin, JW Mellors, MH Malim |
PLoS pathogens | 2007 |
Development of Methods for Coordinate Measurement of Total Cell-Associated and Integrated Human Immunodeficiency Virus Type 1 (HIV-1) DNA Forms in Routine Clinical Samples: Levels Are Not Associated with Clinical Parameters, but Low Levels of Integrated HIV-1 DNA May Be Prognostic for Continued Successful Therapy
JM Carr, KM Cheney, C Coolen, A Davis, D Shaw, W Ferguson, G Chang, G Higgins, C Burrell, P Li |
Journal of clinical microbiology | 2007 |
Residual Human Immunodeficiency Virus Type 1 Viremia in Some Patients on Antiretroviral Therapy Is Dominated by a Small Number of Invariant Clones Rarely Found in Circulating CD4 + T Cells
JR Bailey, AR Sedaghat, T Kieffer, T Brennan, PK Lee, M Wind-Rotolo, CM Haggerty, AR Kamireddi, Y Liu, J Lee, D Persaud, JE Gallant, J Cofrancesco, TC Quinn, CO Wilke, SC Ray, JD Siliciano, RE Nettles, RF Siliciano |
Journal of virology | 2006 |
Viral and Latent Reservoir Persistence in HIV-1–Infected Patients on Therapy
H Kim, AS Perelson, RD Boer |
PLoS computational biology | 2006 |