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Allosteric modulation of the solute carrier transporter SLC39A8 potentiates manganese and cadmium uptake
Kelly L. Damm-Ganamet, Clara Moon, Alan D. Wickenden, Mark Tichenor, Yunhui Ge, Eduardo V. Mercado-Marin, Brian Chiou, Ayla Manughian-Peter, Taraneh Mirzadegan, Jennifer D. Venable, Ramnik J. Xavier, Jennifer E. Towne, Daniel B. Graham, Jacqueline Perrigoue
Kelly L. Damm-Ganamet, Clara Moon, Alan D. Wickenden, Mark Tichenor, Yunhui Ge, Eduardo V. Mercado-Marin, Brian Chiou, Ayla Manughian-Peter, Taraneh Mirzadegan, Jennifer D. Venable, Ramnik J. Xavier, Jennifer E. Towne, Daniel B. Graham, Jacqueline Perrigoue
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Research Article Genetics

Allosteric modulation of the solute carrier transporter SLC39A8 potentiates manganese and cadmium uptake

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Abstract

Solute carrier (SLC) transporters govern the selective transport of diverse molecules across cell membranes, controlling fundamental metabolic and cellular processes. Despite genetic evidence implicating SLC transporters in a variety of human diseases, this family of proteins represents an underexplored target class for therapeutic drug discovery. Here, we discovered a selective potentiator of SLC39A8, a metal transporter associated with inflammatory bowel disease, schizophrenia, and cardiovascular and metabolic disorders. We conducted a drug repurposing screen, identifying efavirenz as a potentiator of manganese and cadmium uptake by SLC39A8 and subsequently generated structure-activity relationships to guide design of analogs. Computational pocket identification methodology and molecular dynamic simulations revealed a ligandable, cryptic pocket that, together with functional mutagenesis, indicated direct target engagement and allosteric modulation. Our findings demonstrate how the combination of experimental data and computational tools represents a powerful synergy that can enhance scientific outcomes. This integrated approach allowed for iterative feedback where insights from experiments informed the model refinements and computational predictions guided future experimental designs. Furthermore, our data established that SLC39A8 transporter activity can be increased pharmacologically, potentially opening avenues for SLC transporter drug discovery.

Authors

Kelly L. Damm-Ganamet, Clara Moon, Alan D. Wickenden, Mark Tichenor, Yunhui Ge, Eduardo V. Mercado-Marin, Brian Chiou, Ayla Manughian-Peter, Taraneh Mirzadegan, Jennifer D. Venable, Ramnik J. Xavier, Jennifer E. Towne, Daniel B. Graham, Jacqueline Perrigoue

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Figure 3

Homology model identifies potential binding pockets on SLC39A8, and mermaid (fish–human) chimeras identify TMDs required for EFV activity.

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Homology model identifies potential binding pockets on SLC39A8, and merm...
(A) Three sites (sites A–C) were identified on the homology model of hSLC39A8 as the potential binding pocket for EFV. Site A corresponds to the putative metal exit cavity, while site B was predicted to be the EFV binding site based on experimental data. SiteMap spheres are shown in pink, SiteFinder spheres in blue, and FTMap probes in yellow. (B) Designed mermaid chimera constructs; human (H) TM domains are shown in red, while zebrafish (F) are green. N indicates N-terminus region of the indicated species (H or F). (C) Impact of mermaid chimeras on EFV potentiation on SLC39A8 (average of n = 2–18 experiments). Data are presented as mean ± SEM.

Copyright © 2026 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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