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ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects
Haiyan Qiu, … , Li-Huei Tsai, Eric J. Huang
Haiyan Qiu, … , Li-Huei Tsai, Eric J. Huang
Published February 10, 2014
Citation Information: J Clin Invest. 2014;124(3):981-999. https://doi.org/10.1172/JCI72723.
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Research Article Neuroscience Article has an altmetric score of 23

ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects

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Abstract

Autosomal dominant mutations of the RNA/DNA binding protein FUS are linked to familial amyotrophic lateral sclerosis (FALS); however, it is not clear how FUS mutations cause neurodegeneration. Using transgenic mice expressing a common FALS-associated FUS mutation (FUS-R521C mice), we found that mutant FUS proteins formed a stable complex with WT FUS proteins and interfered with the normal interactions between FUS and histone deacetylase 1 (HDAC1). Consequently, FUS-R521C mice exhibited evidence of DNA damage as well as profound dendritic and synaptic phenotypes in brain and spinal cord. To provide insights into these defects, we screened neural genes for nucleotide oxidation and identified brain-derived neurotrophic factor (Bdnf) as a target of FUS-R521C–associated DNA damage and RNA splicing defects in mice. Compared with WT FUS, mutant FUS-R521C proteins formed a more stable complex with Bdnf RNA in electrophoretic mobility shift assays. Stabilization of the FUS/Bdnf RNA complex contributed to Bdnf splicing defects and impaired BDNF signaling through receptor TrkB. Exogenous BDNF only partially restored dendrite phenotype in FUS-R521C neurons, suggesting that BDNF-independent mechanisms may contribute to the defects in these neurons. Indeed, RNA-seq analyses of FUS-R521C spinal cords revealed additional transcription and splicing defects in genes that regulate dendritic growth and synaptic functions. Together, our results provide insight into how gain-of-function FUS mutations affect critical neuronal functions.

Authors

Haiyan Qiu, Sebum Lee, Yulei Shang, Wen-Yuan Wang, Kin Fai Au, Sherry Kamiya, Sami J. Barmada, Steven Finkbeiner, Hansen Lui, Caitlin E. Carlton, Amy A. Tang, Michael C. Oldham, Hejia Wang, James Shorter, Anthony J. Filiano, Erik D. Roberson, Warren G. Tourtellotte, Bin Chen, Li-Huei Tsai, Eric J. Huang

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Figure 9

RNA-seq analyses reveal transcription and splicing defects in FUS-R521C spinal cord.

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RNA-seq analyses reveal transcription and splicing defects in FUS-R521C ...
(A) DESeq analyses of RNA-seq data reveal 766 differentially expressed genes in FUS-R521C spinal cord. All mice were euthanized at P38, with the FUS-R521C mice reaching disease end-stage. (B) Fold change and enrichment scores of the GO terms from DAVID Bioinformatics analyses of the differentially expressed genes in FUS-R521C spinal cord. (C) Scattered plot generated by SpliceMap demonstrates intron retention events and the log ratio of intron retention index (RII) of FUS-R521C/WT (y axis) plotted against the log of the intron length (bp) (x-axis). (D) Significantly retained introns in the spinal cord of FUS-R521C mice and RefSeq introns are grouped by length and plotted as a percentage of the total introns. (E and F) The mouse Col7a1 gene encompasses 54 kb on chromosome 9 and contains 119 exons. In FUS-R521C spinal cord, Col7a1 mRNA shows evidence of excessive inclusion of cassette exons (bracketed) and intron retention (arrows). qRT-PCR using primers that detect the presence of 5′ and 3′ splice junctions in Col7a1 further confirmed the RNA-seq data. Quantification of the qRT-PCR data is shown in F. Statistics uses 2-tailed Student’s t test, n = 3.

Copyright © 2025 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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