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Citations to this article

Deficit of tRNALys modification by Cdkal1 causes the development of type 2 diabetes in mice
Fan-Yan Wei, … , Tsutomu Suzuki, Kazuhito Tomizawa
Fan-Yan Wei, … , Tsutomu Suzuki, Kazuhito Tomizawa
Published August 15, 2011
Citation Information: J Clin Invest. 2011;121(9):3598-3608. https://doi.org/10.1172/JCI58056.
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Deficit of tRNALys modification by Cdkal1 causes the development of type 2 diabetes in mice

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Abstract

The worldwide prevalence of type 2 diabetes (T2D), which is caused by a combination of environmental and genetic factors, is increasing. With regard to genetic factors, variations in the gene encoding Cdk5 regulatory associated protein 1–like 1 (Cdkal1) have been associated with an impaired insulin response and increased risk of T2D across different ethnic populations, but the molecular function of this protein has not been characterized. Here, we show that Cdkal1 is a mammalian methylthiotransferase that biosynthesizes 2-methylthio-N6-threonylcarbamoyladenosine (ms2t6A) in tRNALys(UUU) and that it is required for the accurate translation of AAA and AAG codons. Mice with pancreatic β cell–specific KO of Cdkal1 (referred to herein as β cell KO mice) showed pancreatic islet hypertrophy, a decrease in insulin secretion, and impaired blood glucose control. In Cdkal1-deficient β cells, misreading of Lys codon in proinsulin occurred, resulting in a reduction of glucose-stimulated proinsulin synthesis. Moreover, expression of ER stress–related genes was upregulated in these cells, and abnormally structured ER was observed. Further, the β cell KO mice were hypersensitive to high fat diet–induced ER stress. These findings suggest that glucose-stimulated translation of proinsulin may require fully modified tRNALys(UUU), which could potentially explain the molecular pathogenesis of T2D in patients carrying cdkal1 risk alleles.

Authors

Fan-Yan Wei, Takeo Suzuki, Sayaka Watanabe, Satoshi Kimura, Taku Kaitsuka, Atsushi Fujimura, Hideki Matsui, Mohamed Atta, Hiroyuki Michiue, Marc Fontecave, Kazuya Yamagata, Tsutomu Suzuki, Kazuhito Tomizawa

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An Isogenic Human ESC Platform for Functional Evaluation of Genome-wide-Association-Study-Identified Diabetes Genes and Drug Discovery
H Zeng, M Guo, T Zhou, L Tan, CN Chong, T Zhang, X Dong, JZ Xiang, AS Yu, L Yue, Q Qi, T Evans, J Graumann, S Chen
Cell Stem Cell 2016
Identification of 2-methylthio cyclic N6-threonylcarbamoyladenosine (ms2ct6A) as a novel RNA modification at position 37 of tRNAs
B Kang, K Miyauchi, M Matuszewski, GS D'Almeida, MA Rubio, JD Alfonzo, K Inoue, Y Sakaguchi, T Suzuki, E Sochacka, T Suzuki
Nucleic Acids Research 2016
Genome recoding by tRNA modifications
F Tuorto, F Lyko
Open Biology 2016
The origin of efficient triplet state population in sulfur-substituted nucleobases
S Mai, M Pollum, L Martínez-Fernández, N Dunn, P Marquetand, I Corral, CE Crespo-Hernández, L González
Nature Communications 2016
Rapporteur summaries of plenary, symposia, and oral sessions from the XXIIIrd World Congress of Psychiatric Genetics Meeting in Toronto, Canada, 16–20 October 2015:
G Zai, B Alberry, J Arloth, Z Bánlaki, C Bares, E Boot, C Camilo, K Chadha, Q Chen, CB Cole, KT Cost, M Crow, I Ekpor, SB Fischer, L Flatau, S Gagliano, U Kirli, P Kukshal, V Labrie, M Lang, TA Lett, E Maffioletti, R Maier, M Mihaljevic, K Mittal, ET Monson, NL OBrien, SD Østergaard, E Ovenden, S Patel, RE Peterson, JG Pouget, DL Rovaris, L Seaman, B Shankarappa, F Tsetsos, A Vereczkei, C Wang, K Xulu, RK Yuen, J Zhao, CC Zai, JL Kennedy
Psychiatric Genetics 2016
Sequence-specific and Shape-selective RNA Recognition by the Human RNA 5-Methylcytosine Methyltransferase NSun6
T Long, J Li, H Li, M Zhou, XL Zhou, RJ Liu, ED Wang
The Journal of biological chemistry 2016
tRNA base methylation identification and quantification via high-throughput sequencing
WC Clark, ME Evans, D Dominissini, G Zheng, T Pan
RNA (New York, N.Y.) 2016
Profiling of cis-Diol-containing Nucleosides and Ribosylated Metabolites by Boronate-affinity Organic-silica Hybrid Monolithic Capillary Liquid Chromatography/Mass Spectrometry
HP Jiang, CB Qi, JM Chu, BF Yuan, YQ Feng
Scientific Reports 2015
A cautionary tale: the non-causal association between type 2 diabetes risk SNP, rs7756992, and levels of non-coding RNA, CDKAL1-v1
JM Locke, FY Wei, K Tomizawa, MN Weedon, LW Harries
Diabetologia 2015
Association of variants in CDKN2A/2B and CDKAL1 genes with gestational insulin sensitivity and disposition in pregnant Han Chinese women
J Mei, S Liao, Y Liu, Y Tan, H Wang, Y Liang, X Dong, W Song, L Gan, S Deng
Journal of Diabetes Investigation 2015
The emerging role of complex modifications of tRNALysUUU in signaling pathways
P Thiaville, V Crecy-Lagard
Microbial Cell 2015
The Crystal Structure and Small-Angle X-Ray Analysis of CsdL/TcdA Reveal a New tRNA Binding Motif in the MoeB/E1 Superfamily
M López-Estepa, A Ardá, M Savko, A Round, WE Shepard, M Bruix, M Coll, FJ Fernández, J Jiménez-Barbero, MC Vega, P Kursula
PloS one 2015
Transfer RNA detection by small RNA deep sequencing and disease association with myelodysplastic syndromes
Y Guo, A Bosompem, S Mohan, B Erdogan, F Ye, KC Vickers, Q Sheng, S Zhao, CI Li, PF Su, M Jagasia, SA Strickland, EA Griffiths, AS Kim
BMC Genomics 2015
Erchen Decoction Prevents High-Fat Diet Induced Metabolic Disorders in C57BL/6 Mice
BZ Gao, JC Chen, LH Liao, JQ Xu, XF Lin, SS Ding
Evidence-Based Complementary and Alternative Medicine 2015
Identification of determinants for tRNA substrate recognition by Escherichia coli C/U34 2′-O-methyltransferase
M Zhou, T Long, ZP Fang, XL Zhou, RJ Liu, ED Wang
RNA biology 2015
Targeting the pancreatic β-cell to treat diabetes
A Vetere, A Choudhary, SM Burns, BK Wagner
Nature Reviews Drug Discovery 2014
Radical S -Adenosylmethionine Enzymes
JB Broderick, BR Duffus, KS Duschene, EM Shepard
Chemical Reviews 2014
Methylated nucleosides in tRNA and tRNA methyltransferases
H Hori
Frontiers in Genetics 2014
tRNA gene copy number variation in humans
JR Iben, RJ Maraia
Gene 2014
Recent Advances in Radical SAM Enzymology: New Structures and Mechanisms
J Wang, RP Woldring, GD Román-Meléndez, AM McClain, BR Alzua, EN Marsh
ACS chemical biology 2014
Discovery of the  -barrel-type RNA methyltransferase responsible for N6-methylation of N6-threonylcarbamoyladenosine in tRNAs
S Kimura, K Miyauchi, Y Ikeuchi, PC Thiaville, V Crecy-Lagard, T Suzuki
Nucleic Acids Research 2014
Emerging roles of tRNA in adaptive translation, signalling dynamics and disease
S Kirchner, Z Ignatova
Nature Reviews Genetics 2014
Treatment of type 2 diabetes, lifestyle, GLP1 agonists and DPP4 inhibitors
GH Tomkin
World journal of diabetes 2014
Prediction of uridine modifications in tRNA sequences
B Panwar, GP Raghava
BMC bioinformatics 2014
Adaptive Human CDKAL1 Variants Underlie Hormonal Response Variations at the Enteroinsular Axis
CL Chang, JJ Cai, SY Huang, PJ Cheng, HY Chueh, SY Hsu, K Maedler
PloS one 2014
Different types of secondary information in the genetic code
RJ Maraia, JR Iben
RNA (New York, N.Y.) 2014
Modify or die? - RNA modification defects in metazoans
LP Sarin, SA Leidel
RNA biology 2014
Diversity of the biosynthesis pathway for threonylcarbamoyladenosine (t 6 A), a universal modification of tRNA
PC Thiaville, D Iwata-Reuyl, V Crécy-Lagard
RNA biology 2014
Leptin's Role in Lipodystrophic and Nonlipodystrophic Insulin-Resistant and Diabetic Individuals
HS Moon, M Dalamaga, SY Kim, SA Polyzos, OP Hamnvik, F Magkos, J Paruthi, CS Mantzoros
Endocrine reviews 2013
Bridging the Gap Between Genetic Associations and Molecular Mechanisms for Type 2 Diabetes
HJ Ng, AL Gloyn
Current Diabetes Reports 2013
Islet inflammation: a unifying target for diabetes treatment?
Y Imai, AD Dobrian, MA Morris, JL Nadler
Trends in Endocrinology & Metabolism 2013
Systematic evaluation of validated type 2 diabetes and glycaemic trait loci for association with insulin clearance
MO Goodarzi, X Guo, J Cui, MR Jones, T Haritunians, AH Xiang, YD Chen, KD Taylor, TA Buchanan, WA Hsueh, LJ Raffel, JI Rotter
Diabetologia 2013
Two Fe-S clusters catalyze sulfur insertion by radical-SAM methylthiotransferases
F Forouhar, S Arragain, M Atta, S Gambarelli, JM Mouesca, M Hussain, R Xiao, S Kieffer-Jaquinod, J Seetharaman, TB Acton, GT Montelione, E Mulliez, JF Hunt, M Fontecave
Nature Chemical Biology 2013
The tRNA recognition mechanism of the minimalist SPOUT methyltransferase, TrmL
RJ Liu, M Zhou, ZP Fang, M Wang, XL Zhou, ED Wang
Nucleic Acids Research 2013
Diabetes genes identified by genome-wide association studies are regulated in mice by nutritional factors in metabolically relevant tissues and by glucose concentrations in islets
MM Ho, P Yoganathan, K Chu, S Karunakaran, JD Johnson, SM Clee
BMC genetics 2013
RNAi screening in primary human hepatocytes of genes implicated in genome-wide association studies for roles in type 2 diabetes identifies roles for CAMK1D and CDKAL1, among others, in hepatic glucose regulation
S Haney, J Zhao, S Tiwari, K Eng, LT Guey, E Tien
PloS one 2013
tRNA methyltransferase homolog gene TRMT10A mutation in young onset diabetes and primary microcephaly in humans
M Igoillo-Esteve, A Genin, N Lambert, J Désir, I Pirson, B Abdulkarim, N Simonis, A Drielsma, L Marselli, P Marchetti, P Vanderhaeghen, DL Eizirik, W Wuyts, C Julier, AJ Chakera, S Ellard, AT Hattersley, M Abramowicz, M Cnop
PLoS genetics 2013
CDKAL1 gene rs7756992 A/G polymorphism and type 2 diabetes mellitus: a meta-analysis of 62,567 subjects
Y Li, L Wang, X Lu, Z Yang, X Wang, C Zhou, J Xu, Y Qian, A Chen
Scientific Reports 2013
Human cells have a limited set of tRNA anticodon loop substrates of the tRNA isopentenyltransferase TRIT1 tumor suppressor
TN Lamichhane, S Mattijssen, RJ Maraia
Molecular and cellular biology 2013
Association of genetic variants with isolated fasting hyperglycaemia and isolated postprandial hyperglycaemia in a Han Chinese population
X Kong, J Hong, Y Chen, L Chen, Z Zhao, Q Li, J Ge, G Chen, X Guo, J Lu, J Weng, W Jia, L Ji, J Xiao, Z Shan, J Liu, H Tian, Q Ji, D Zhu, Z Zhou, G Shan, W Yang
PloS one 2013
Lack of tRNA modification isopentenyl-A37 alters mRNA decoding and causes metabolic deficiencies in fission yeast
TN Lamichhane, NH Blewett, AK Crawford, VA Cherkasova, JR Iben, TJ Begley, PJ Farabaugh, RJ Maraia
Molecular and cellular biology 2013
Genetic Modifiers of Cystic Fibrosis-Related Diabetes
SM Blackman, CW Commander, C Watson, KM Arcara, LJ Strug, JR Stonebraker, FA Wright, JM Rommens, L Sun, RG Pace, SA Norris, PR Durie, ML Drumm, MR Knowles, GR Cutting
Diabetes 2013
The CDK5 repressor CDK5RAP1 is a methylthiotransferase acting on nuclear and mitochondrial RNA
V Reiter, DM Matschkal, M Wagner, D Globisch, AC Kneuttinger, M Müller, T Carell
Nucleic Acids Research 2012
Emerging themes in radical SAM chemistry
KA Shisler, JB Broderick
Current Opinion in Structural Biology 2012
From Mice to Humans
F McMurray, L Moir, RD Cox
Current Diabetes Reports 2012
In vitro biosynthesis of a universal t6A tRNA modification in Archaea and Eukarya
L Perrochia, E Crozat, A Hecker, W Zhang, J Bareille, B Collinet, H Tilbeurgh, P Forterre, T Basta
Nucleic Acids Research 2012
A cyclic form of N6-threonylcarbamoyladenosine as a widely distributed tRNA hypermodification
K Miyauchi, S Kimura, T Suzuki
Nature Chemical Biology 2012
Radical SAM enzymes in methylation and methylthiolation
RU Hutcheson, JB Broderick
Metallomics 2012
Deletion of CDKAL1 affects high-fat diet-induced fat accumulation and glucose-stimulated insulin secretion in mice, indicating relevance to diabetes
T Okamura, R Yanobu-Takanashi, F Takeuchi, M Isono, K Akiyama, Y Shimizu, M Goto, YQ Liang, K Yamamoto, T Katsuya, A Fujioka, K Ohnaka, R Takayanagi, T Ogihara, Y Yamori, N Kato
PloS one 2012
CDK5 regulatory subunit-associated protein 1-like 1 (CDKAL1) is a tail-anchored protein in the endoplasmic reticulum (ER) of insulinoma cells
S Brambillasca, A Altkrueger, SF Colombo, A Friederich, P Eickelmann, M Mark, N Borgese, M Solimena
The Journal of biological chemistry 2012
cDNA cloning and mRNA expression of cat and dog Cdkal1
T Arai, S Ishikawa, L Gebin, H Takemitsu, M Fujiwara, N Mori, Y Hatano, T Suzuki, Mori, N Nakao, K Kawasumi, T Sako, Yamamoto
2012
Beta-Cell Failure, Stress, and Type 2 Diabetes
RJ Kaufman
New England Journal of Medicine 2011
Pulmonary surfactant: an immunological perspective
ZC Chroneos, Z Sever-Chroneos, VL Shepherd
Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2009

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