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Citations to this article

A HapMap harvest of insights into the genetics of common disease
Teri A. Manolio, … , Lisa D. Brooks, Francis S. Collins
Teri A. Manolio, … , Lisa D. Brooks, Francis S. Collins
Published May 1, 2008
Citation Information: J Clin Invest. 2008;118(5):1590-1605. https://doi.org/10.1172/JCI34772.
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A HapMap harvest of insights into the genetics of common disease

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Abstract

The International HapMap Project was designed to create a genome-wide database of patterns of human genetic variation, with the expectation that these patterns would be useful for genetic association studies of common diseases. This expectation has been amply fulfilled with just the initial output of genome-wide association studies, identifying nearly 100 loci for nearly 40 common diseases and traits. These associations provided new insights into pathophysiology, suggesting previously unsuspected etiologic pathways for common diseases that will be of use in identifying new therapeutic targets and developing targeted interventions based on genetically defined risk. In addition, HapMap-based discoveries have shed new light on the impact of evolutionary pressures on the human genome, suggesting multiple loci important for adapting to disease-causing pathogens and new environments. In this review we examine the origin, development, and current status of the HapMap; its prospects for continued evolution; and its current and potential future impact on biomedical science.

Authors

Teri A. Manolio, Lisa D. Brooks, Francis S. Collins

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Associating Multivariate Quantitative Phenotypes with Genetic Variants in Family Samples with a Novel Kernel Machine Regression Method
Q Yan, DE Weeks, JC Celedon, HK Tiwari, B Li, X Wang, WY Lin, XY Lou, G Gao, W Chen, N Liu
Genetics 2015
A Sequence Kernel Association Test for Dichotomous Traits in Family Samples under a Generalized Linear Mixed Model
Q Yan, HK Tiwari, N Yi, G Gao, K Zhang, WY Lin, XY Lou, X Cui, N Liu
Human Heredity 2015
Genetic Susceptibility to Rhodococcus equi
CM McQueen, SV Dindot, MJ Foster, ND Cohen
Journal of Veterinary Internal Medicine 2015
Genome-wide association study of myelosuppression in non-small-cell lung cancer patients with platinum-based chemotherapy.
Cao S, Wang S, Ma H, Tang S, Sun C, Dai J, Wang C, Shu Y, Xu L, Yin R, Song X, Chen H, Han B, Li Q, Wu J, Bai C, Chen J, Jin G, Hu Z, Lu D, Shen H
The Pharmacogenomics Journal 2015
The American cranberry: first insights into the whole genome of a species adapted to bog habitat
J Polashock, E Zelzion, D Fajardo, J Zalapa, L Georgi, D Bhattacharya, N Vorsa
BMC plant biology 2014
Genetic factors regulating lung vasculature and immune cell functions associate with resistance to pneumococcal infection
MS Jonczyk, M Simon, S Kumar, VE Fernandes, N Sylvius, AM Mallon, P Denny, PW Andrew
PloS one 2014
Common and Rare Genetic Risk Factors for Glaucoma
R Wang, JL Wiggs
Cold Spring Harbor Perspectives in Medicine 2014
Kernel-Machine Testing Coupled with a Rank-Truncation Method for Genetic Pathway Analysis
Q Yan, HK Tiwari, N Yi, WY Lin, G Gao, XY Lou, X Cui, N Liu
Genetic Epidemiology 2014
Testing Gene-Gene Interactions in Genome Wide Association Studies
JK Hu, X Wang, P Wang
Genetic Epidemiology 2014
Association of the endothelial nitric oxide synthase gene G894T polymorphism with the risk of diabetic nephropathy in Qassim region, Saudi Arabia—A pilot study
AM Mackawy, AA Khan, ME Badawy
Meta Gene 2014
Association between vascular endothelial growth factor gene polymorphisms and bladder cancer risk
Y Yang, X Zhang, D Song, J Wei
Molecular and Clinical Oncology 2014
Big data, open science and the brain: lessons learned from genomics
S Choudhury, JR Fishman, ML McGowan, ET Juengst
Frontiers in human neuroscience 2014
Integrated Pathway-Based Approach Identifies Association between Genomic Regions at CTCF and CACNB2 and Schizophrenia
D Juraeva, B Haenisch, M Zapatka, J Frank, , , SH Witt, TW Mühleisen, J Treutlein, J Strohmaier, S Meier, F Degenhardt, I Giegling, S Ripke, M Leber, C Lange, TG Schulze, R Mössner, I Nenadic, H Sauer, D Rujescu, W Maier, A Børglum, R Ophoff, S Cichon, MM Nöthen, M Rietschel, M Mattheisen, B Brors
PLoS genetics 2014
Association between FOXO3A gene polymorphisms and human longevity: a meta-analysis
JM Bao, XL Song, YQ Hong, HL Zhu, C Li, T Zhang, W Chen, SC Zhao, Q Chen
Asian Journal of Andrology 2014
Exquisite Sequence Selectivity with Small Conditional RNAs
JB Sternberg, NA Pierce
Nano letters 2014
Hypothesis-independent pathway analysis implicates GABA and Acetyl-CoA metabolism in primary open-angle glaucoma and normal-pressure glaucoma
JN Bailey, BL Yaspan, LR Pasquale, MA Hauser, JH Kang, SJ Loomis, M Brilliant, DL Budenz, WG Christen, J Fingert, D Gaasterland, T Gaasterland, P Kraft, RK Lee, PR Lichter, Y Liu, CA McCarty, SE Moroi, JE Richards, T Realini, JS Schuman, WK Scott, K Singh, AJ Sit, D Vollrath, G Wollstein, DJ Zack, K Zhang, MA Pericak-Vance, RR Allingham, RN Weinreb, JL Haines, JL Wiggs
Human Genetics 2014
A Custom Correlation Coefficient (CCC) Approach for Fast Identification of Multi-SNP Association Patterns in Genome-Wide SNPs Data: Fast Identification of Multi-SNP Patterns in GWAS
S Climer, W Yang, L las Fuentes, VG Dávila-Román, CC Gu
Genetic Epidemiology 2014
A statistical framework to guide sequencing choices in pedigrees
CY Cheung, EM Blue, EM Wijsman
The American Journal of Human Genetics 2014
LincRNA-uc002yug.2 involves in alternative splicing of RUNX1 and serves as a predictor for esophageal cancer and prognosis
H Wu, J Zheng, J Deng, L Zhang, N Li, W Li, F Li, J Lu, Y Zhou
Oncogene 2014
The road from next-generation sequencing to personalized medicine
ML Gonzalez-Garay
Personalized Medicine 2014
A Novel Method for Detecting Association Between DNA Methylation and Diseases Using Spatial Information
WK Yip, H Fier, DL DeMeo, M Aryee, N Laird, C Lange
Genetic Epidemiology 2014
Identifying genetic relatives without compromising privacy
D He, NA Furlotte, F Hormozdiari, JW Joo, A Wadia, R Ostrovsky, A Sahai, E Eskin
Genome research 2014
Identifying Causal Variants at Loci with Multiple Signals of Association
F Hormozdiari, E Kostem, EY Kang, B Pasaniuc, E Eskin
Genetics 2014
Variants in Complement Factor H and Complement Factor H-Related Protein Genes, CFHR3 and CFHR1, Affect Complement Activation in IgA Nephropathy
L Zhu, YL Zhai, FM Wang, P Hou, JC Lv, DM Xu, SF Shi, LJ Liu, F Yu, MH Zhao, J Novak, AG Gharavi, H Zhang
Journal of the American Society of Nephrology : JASN 2014
TGF  Receptor 1: An Immune Susceptibility Gene in HPV-Associated Cancer
C Levovitz, D Chen, E Ivansson, U Gyllensten, JP Finnigan, S Alshawish, W Zhang, EE Schadt, MR Posner, EM Genden, P Boffetta, AG Sikora
Cancer research 2014
Guidelines for the tetra-primer ARMS-PCR technique development.
Medrano RF, de Oliveira CA
Molecular Biotechnology 2014
Review article: genetic factors that modify the outcome of viral hepatitis.
Stättermayer AF, Scherzer T, Beinhardt S, Rutter K, Hofer H, Ferenci P
Alimentary Pharmacology & Therapeutics 2014
InterPregGen: genetic studies of pre-eclampsia in three continents
Morgan L, McGinnis R, Steinthorsdottir V, Svyatova G, Zakhidova N, Lee WK, Iversen AC, Magnus P, Walker J, Casas JP, Sultanov S, Laivuori H
Norsk epidemiologi = Norwegian journal of epidemiology 2014
Association of μ-opioid receptor gene (OPRM1) haplotypes with postoperative nausea and vomiting.
Sugino S, Hayase T, Higuchi M, Saito K, Moriya H, Kumeta Y, Kurosawa N, Namiki A, Janicki PK
Experimental Brain Research 2014
Cell therapies and regenerative medicine.
Blum HE
Hepatology International 2014
Meta-analysis of the association between polymorphisms of estrogen receptor α genes rs9340799 and rs2234693 and Alzheimer's disease: evidence from 23 articles.
Pan Y, Li Y, Shen H
American journal of Alzheimer's disease and other dementias 2014
Guilt by rewiring: gene prioritization through network rewiring in Genome Wide Association Studies
L Hou, M Chen, CK Zhang, J Cho, H Zhao
Human Molecular Genetics 2013
Genetic Interactions among Idd3 , Idd5.1 , Idd5.2 , and Idd5.3 Protective Loci in the Nonobese Diabetic Mouse Model of Type 1 Diabetes
X Lin, EE Hamilton-Williams, DB Rainbow, KM Hunter, YD Dai, J Cheung, LB Peterson, LS Wicker, LA Sherman
Journal of immunology (Baltimore, Md. : 1950) 2013
The genetics of NAFLD
QM Anstee, CP Day
Nature Reviews Gastroenterology & Hepatology 2013
Genetic Epidemiology of Type 2 Diabetes and Cardiovascular Diseases in Africa
F Tekola-Ayele, AA Adeyemo, CN Rotimi
Progress in Cardiovascular Diseases 2013
GStream: improving SNP and CNV coverage on genome-wide association studies
A Alonso, S Marsal, R Tortosa, O Canela-Xandri, A Julià
PloS one 2013
Implementing genomic medicine in the clinic: the future is here
TA Manolio, RL Chisholm, B Ozenberger, DM Roden, MS Williams, R Wilson, D Bick, EP Bottinger, MH Brilliant, C Eng, KA Frazer, B Korf, DH Ledbetter, JR Lupski, C Marsh, D Mrazek, MF Murray, PH O’Donnell, DJ Rader, MV Relling, AR Shuldiner, D Valle, R Weinshilboum, ED Green, GS Ginsburg
Genetics in Medicine 2013
Evaluating Rare Variants in Complex Disorders Using Next-Generation Sequencing
M Ezewudo, ME Zwick
Current Psychiatry Reports 2013
Anticipating the arrival of low-penetrance genetic testing to primary care medicine
BA Tarini, N Exe, BJ Zikmund-Fisher
Journal of Community Genetics 2013
A new way to protect privacy in large-scale genome-wide association studies
L Kamm, D Bogdanov, S Laur, J Vilo
Bioinformatics 2013
DNA replication timing and higher-order nuclear organization determine single-nucleotide substitution patterns in cancer genomes
L Liu, S De, F Michor
Nature Communications 2013
Genome-wide association studies of maximum number of drinks
Y Pan, X Luo, X Liu, LY Wu, Q Zhang, L Wang, W Wang, L Zuo, KS Wang
Journal of Psychiatric Research 2013
GIGI: An Approach to Effective Imputation of Dense Genotypes on Large Pedigrees
CY Cheung, EA Thompson, EM Wijsman
The American Journal of Human Genetics 2013
On the simultaneous association analysis of large genomic regions: a massive multi-locus association test
D Qiao, MH Cho, H Fier, PS Bakke, A Gulsvik, EK Silverman, C Lange
Bioinformatics 2013
eALPS: Estimating Abundance Levels in Pooled Sequencing Using Available Genotyping Data
I Eskin, F Hormozdiari, L Conde, J Riby, CF Skibola, E Eskin, E Halperin
Journal of Computational Biology 2013
Human genome-guided identification of memory-modulating drugs
A Papassotiropoulos, C Gerhards, A Heck, S Ackermann, A Aerni, N Schicktanz, B Auschra, P Demougin, E Mumme, T Elbert, V Ertl, L Gschwind, E Hanser, KD Huynh, F Jessen, IT Kolassa, A Milnik, P Paganetti, K Spalek, C Vogler, A Muhs, A Pfeifer, DJ de Quervain
Proceedings of the National Academy of Sciences 2013
Genome wide association studies in presence of misclassified binary responses
S Smith, EH Hay, N Farhat, R Rekaya
BMC genetics 2013
Fast association tests for genes with FAST
P Chanda, H Huang, DE Arking, JS Bader
PloS one 2013
The geometric increase in meta-analyses from China in the genomic era
JP Ioannidis, CQ Chang, TK Lam, SD Schully, MJ Khoury
PloS one 2013
Common dysfunctional variants in ABCG2 are a major cause of early-onset gout
H Matsuo, K Ichida, T Takada, A Nakayama, H Nakashima, T Nakamura, Y Kawamura, Y Takada, K Yamamoto, H Inoue, Y Oikawa, M Naito, A Hishida, K Wakai, C Okada, S Shimizu, M Sakiyama, T Chiba, H Ogata, K Niwa, M Hosoyamada, A Mori, N Hamajima, H Suzuki, Y Kanai, Y Sakurai, T Hosoya, T Shimizu, N Shinomiya
Scientific Reports 2013
The power of meta-analysis in genome-wide association studies
OA Panagiotou, CJ Willer, JN Hirschhorn, JP Ioannidis
Annual Review of Genomics and Human Genetics 2013
Identification of antithrombin-modulating genes. Role of LARGE, a gene encoding a bifunctional glycosyltransferase, in the secretion of proteins?
ME de la Morena-Barrio, A Buil, AI Antón, I Martínez-Martínez, A Miñano, R Gutiérrez-Gallego, J Navarro-Fernández, S Aguila, JC Souto, V Vicente, JM Soria, J Corral
PloS one 2013
Comprehensive characterization of human genome variation by high coverage whole-genome sequencing of forty four Caucasians
H Shen, J Li, J Zhang, C Xu, Y Jiang, Z Wu, F Zhao, L Liao, J Chen, Y Lin, Q Tian, CJ Papasian, HW Deng
PloS one 2013
Endothelial NO synthase gene polymorphisms and risk of ischemic stroke in Asian population: a meta-analysis
M Wang, X Jiang, W Wu, D Zhang
PloS one 2013
SNPflow: a lightweight application for the processing, storing and automatic quality checking of genotyping assays
H Weissensteiner, M Haun, S Schönherr, M Neuner, L Forer, G Specht, A Kloss-Brandstätter, F Kronenberg, S Coassin
PloS one 2013
[Important genodermatoses for the practitioner].
Itin P, Salgado DA
2013
Inflammatory priming predisposes to age−related retinal degeneration in mice
Debarshi Mustafi, Tadao Maeda, Hideo Kohno, Joseph Nadeau, Krzysztof Palczewski
Journal of Clinical Investigation 2012
Complement factor H genotypes impact risk of age-related macular degeneration by interaction with oxidized phospholipids
PX Shaw, L Zhang, M Zhang, H Du, L Zhao, C Lee, S Grob, SL Lim, G Hughes, J Lee, M Bedell, MH Nelson, F Lu, M Krupa, J Luo, H Ouyang, Z Tu, Z Su, J Zhu, X Wei, Z Feng, Y Duan, Z Yang, H Ferreyra, DU Bartsch, I Kozak, L Zhang, F Lin, H Sun, H Feng, K Zhang
Proceedings of the National Academy of Sciences 2012
A two-SNP IL-6 promoter haplotype is associated with increased lung cancer risk
J Chen, RY Liu, L Yang, J Zhao, X Zhao, D Lu, N Yi, B Han, XF Chen, K Zhang, J He, Z Lei, Y Zhou, B Pasche, X Li, HT Zhang
Journal of Cancer Research and Clinical Oncology 2012
Fixing the broken system of genetic locus symbols: Parkinson disease and dystonia as examples
C Marras, K Lohmann, A Lang, C Klein
Neurology 2012
Rare and common variants: twenty arguments
G Gibson
Nature Reviews Genetics 2012
Inter-chromosomal level of genome organization and longevity-related phenotypes in humans
AM Kulminski, I Culminskaya, AI Yashin
AGE 2012
New Genetic Insights from Autoimmune Thyroid Disease
TF Davies, R Latif, X Yin
Journal of Thyroid Research 2012
Utility-preserving transaction data anonymization with low information loss
G Loukides, A Gkoulalas-Divanis
Expert Systems with Applications 2012
Insights into the Genetic Architecture of Diabetic Nephropathy
ND Palmer, BI Freedman
Current Diabetes Reports 2012
Early Determinants of Obesity: Genetic, Epigenetic, and In Utero Influences
KE Rhee, S Phelan, J McCaffery
International journal of pediatrics 2012
Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies
H Hong, L Xu, J Liu, WD Jones, Z Su, B Ning, R Perkins, W Ge, K Miclaus, L Zhang, K Park, B Green, T Han, H Fang, CG Lambert, SC Vega, SM Lin, N Jafari, W Czika, RD Wolfinger, F Goodsaid, W Tong, L Shi
PloS one 2012
A Central Role for Long Non-Coding RNA in Cancer
SA Mitra, AP Mitra, TJ Triche
Frontiers in Genetics 2012
The mystery of missing heritability: Genetic interactions create phantom heritability
O Zuk, E Hechter, SR Sunyaev, ES Lander
Proceedings of the National Academy of Sciences 2012
Data sharing in neuroimaging research
JB Poline, JL Breeze, S Ghosh, K Gorgolewski, YO Halchenko, M Hanke, C Haselgrove, KG Helmer, DB Keator, DS Marcus, RA Poldrack, Y Schwartz, J Ashburner, DN Kennedy
Frontiers in Neuroinformatics 2012
The molecular basis of chemoradiosensitivity in rectal cancer:implications for personalized therapies
M Grade, HA Wolff, J Gaedcke, BM Ghadimi
Langenbeck's Archives of Surgery 2012
Age of onset and effect size in genome-wide association studies
AJ Agopian, LM Eastcott, LE Mitchell
Birth Defects Research Part A: Clinical and Molecular Teratology 2012
The role of large pedigrees in an era of high-throughput sequencing
EM Wijsman
Human Genetics 2012
Epistasis and immunity: the role of genetic interactions in autoimmune diseases
AM Rose, LC Bell
Immunology 2012
Rare genetic variants and treatment response: sample size and analysis issues
JS Witte
Statistics in Medicine 2012
Cis-acting regulation of brain-specific ANK3 gene expression by a genetic variant associated with bipolar disorder
EH Rueckert, D Barker, D Ruderfer, SE Bergen, C O'Dushlaine, CJ Luce, SD Sheridan, KM Theriault, K Chambert, J Moran, SM Purcell, JM Madison, SJ Haggarty, P Sklar
Molecular Psychiatry 2012
CNVs: Harbingers of a Rare Variant Revolution in Psychiatric Genetics
D Malhotra, J Sebat
Cell 2012
Meta-analysis of genetic association studies under heterogeneity
B Neupane, M Loeb, SS Anand, J Beyene
European Journal of Human Genetics 2012
Genotype imputation in a coalescent model with infinitely-many-sites mutation
L Huang, EO Buzbas, NA Rosenberg
Theoretical Population Biology 2012
Genome-wide association studies in mice
J Flint, E Eskin
Nature Reviews Genetics 2012
An Exponential Combination Procedure for Set-Based Association Tests in Sequencing Studies
LS Chen, L Hsu, ER Gamazon, NJ Cox, DL Nicolae
The American Journal of Human Genetics 2012
Exome sequencing-driven discovery of coding polymorphisms associated with common metabolic phenotypes
A Albrechtsen, N Grarup, Y Li, T Sparsø, G Tian, H Cao, T Jiang, SY Kim, T Korneliussen, Q Li, C Nie, R Wu, L Skotte, AP Morris, C Ladenvall, S Cauchi, A Stančáková, G Andersen, A Astrup, K Banasik, AJ Bennett, L Bolund, G Charpentier, Y Chen, JM Dekker, AS Doney, M Dorkhan, T Forsen, TM Frayling, CJ Groves, Y Gui, G Hallmans, AT Hattersley, K He, GA Hitman, J Holmkvist, S Huang, H Jiang, X Jin, JM Justesen, K Kristiansen, J Kuusisto, M Lajer, O Lantieri, W Li, H Liang, Q Liao, X Liu, T Ma, X Ma, MP Manijak, M Marre, J Mokrosiński, AD Morris, B Mu, AA Nielsen, G Nijpels, P Nilsson, CN Palmer, NW Rayner, F Renström, R Ribel-Madsen, N Robertson, O Rolandsson, P Rossing, TW Schwartz, PE Slagboom, M Sterner, M Tang, L Tarnow, T Tuomi, E Riet, N Leeuwen, TV Varga, MA Vestmar, M Walker, B Wang, Y Wang, H Wu, F Xi, L Yengo, C Yu, X Zhang, J Zhang, Q Zhang, W Zhang, H Zheng, Y Zhou, D Altshuler, LM Hart, PW Franks, B Balkau, P Froguel, MI McCarthy, M Laakso, L Groop, C Christensen, I Brandslund, T Lauritzen, DR Witte, A Linneberg, T Jørgensen, T Hansen, J Wang, R Nielsen, O Pedersen
Diabetologia 2012
'Location, Location, Location': a spatial approach for rare variant analysis and an application to a study on non-syndromic cleft lip with or without cleft palate
H Fier, S Won, D Prokopenko, T AlChawa, KU Ludwig, R Fimmers, EK Silverman, M Pagano, E Mangold, C Lange
Bioinformatics 2012
iLOCi: a SNP interaction prioritization technique for detecting epistasis in genome-wide association studies
J Piriyapongsa, C Ngamphiw, A Intarapanich, S Kulawonganunchai, A Assawamakin, C Bootchai, PJ Shaw, S Tongsima
BMC Genomics 2012
Sample size and statistical power calculation in genetic association studies
EP Hong, JW Park
Genomics & Informatics 2012
Personalized medicine in cardiovascular diseases
MS Lee, AJ Flammer, LO Lerman, A Lerman
Korean Circulation Journal 2012
Cyclin D3 coordinates the cell cycle during differentiation to regulate erythrocyte size and number
VG Sankaran, LS Ludwig, E Sicinska, J Xu, DE Bauer, JC Eng, HC Patterson, RA Metcalf, Y Natkunam, SH Orkin, P Sicinski, ES Lander, HF Lodish
Genes & development 2012
Finding a place for genomics in health disparities research
SM Fullerton, S Knerr, W Burke
Public health genomics 2012
Human longevity and common variations in the LMNA gene: a meta-analysis
KN Conneely, BC Capell, MR Erdos, P Sebastiani, N Solovieff, AJ Swift, CT Baldwin, T Budagov, N Barzilai, G Atzmon, AA Puca, TT Perls, BJ Geesaman, M Boehnke, FS Collins
Aging Cell 2012
Community Engagement about Genetic Variation Research
SF Terry, KD Christensen, S Metosky, G Rudofsky, KP Deignan, H Martinez, P Johnson-Moore, T Citrin
Population Health Management 2012
Human Genome-Wide Association and Mouse Knockout Approaches Identify Platelet Supervillin as an Inhibitor of Thrombus Formation Under Shear Stress
LC Edelstein, EJ Luna, IB Gibson, M Bray, Y Jin, A Kondkar, S Nagalla, N Hadjout-Rabi, TC Smith, D Covarrubias, SN Jones, F Ahmad, M Stolla, X Kong, Z Fang, W Bergmeier, C Shaw, SM Leal, PF Bray
Circulation 2012
Hepatocellular carcinoma: Towards personalized medicine
D Miki, H Ochi, CN Hayes, H Aikata, K Chayama
Cancer Science 2012
Assessment of systematic effects of methodological characteristics on candidate genetic associations.
Aljasir B, Ioannidis JP, Yurkiewich A, Moher D, Higgins JP, Arora P, Little J
Human Genetics 2012
Systems genetics in "-omics" era: current and future development.
Li H
2012
New routes for transgenesis of the mouse.
Belizário JE, Akamini P, Wolf P, Strauss B, Xavier-Neto J
Journal of Applied Genetics 2012
World Congress on Insulin Resistance, Diabetes, and Cardiovascular Disease: Part 3
ZT Bloomgarden
Diabetes care 2011
The Genomic Architecture of Sporadic Heart Failure
GW Dorn, AJ Marian, H Watkins, C Seidman
Circulation research 2011
The genetics of asthma and allergic disease: a 21st century perspective
C Ober, TC Yao
Immunological Reviews 2011
Quantitative Models for Causal Analysis in the Era of Genome Wide Association Studies
SS Coughlin
The open health services and policy journal 2011
Contributions of dopamine-related genes and environmental factors to highly sensitive personality: a multi-step neuronal system-level approach
C Chen, C Chen, R Moyzis, H Stern, Q He, H Li, J Li, B Zhu, Q Dong
PloS one 2011
The PhenX Toolkit: Get the Most From Your Measures
CM Hamilton, LC Strader, JG Pratt, D Maiese, T Hendershot, RK Kwok, JA Hammond, W Huggins, D Jackman, H Pan, DS Nettles, TH Beaty, LA Farrer, P Kraft, ML Marazita, JM Ordovas, CN Pato, MR Spitz, D Wagener, M Williams, HA Junkins, WR Harlan, EM Ramos, J Haines
American Journal of Epidemiology 2011
Incorporating genetics into your studies: a guide for social scientists
DM Dick, SJ Latendresse, B Riley
Frontiers in psychiatry / Frontiers Research Foundation 2011
Quantifying the underestimation of relative risks from genome-wide association studies
C Spencer, E Hechter, D Vukcevic, P Donnelly
PLoS genetics 2011
A powerful hybrid approach to select top single-nucleotide polymorphisms for genome-wide association study
J Wang, S Shete
BMC genetics 2011
Impact of Phenotype Definition on Genome-Wide Association Signals: Empirical Evaluation in Human Immunodeficiency Virus Type 1 Infection
E Evangelou, J Fellay, S Colombo, J Martinez-Picado, N Obel, DB Goldstein, A Telenti, JP Ioannidis
American Journal of Epidemiology 2011
Annotating individual human genomes
A Torkamani, AA Zeeland, EJ Topol, NJ Schork
Genomics 2011
Identification of IL6R and chromosome 11q13.5 as risk loci for asthma
MA Ferreira, MC Matheson, DL Duffy, GB Marks, J Hui, PL Souëf, P Danoy, S Baltic, DR Nyholt, M Jenkins, C Hayden, G Willemsen, W Ang, M Kuokkanen, J Beilby, F Cheah, EJ de Geus, A Ramasamy, S Vedantam, V Salomaa, PA Madden, AC Heath, JL Hopper, PM Visscher, B Musk, SR Leeder, MR Jarvelin, C Pennell, DI Boomsma, JN Hirschhorn, H Walters, NG Martin, A James, G Jones, MJ Abramson, CF Robertson, SC Dharmage, MA Brown, GW Montgomery, PJ Thompson
The Lancet 2011
Realizing the promise of population biobanks: a new model for translation
MJ Murtagh, I Demir, JR Harris, PR Burton
Human Genetics 2011
Genome-wide association study of Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis in Europe
E Génin, M Schumacher, JC Roujeau, L Naldi, Y Liss, R Kazma, P Sekula, A Hovnanian, M Mockenhaupt
Orphanet Journal of Rare Diseases 2011
Enriching targeted sequencing experiments for rare disease alleles
TL Edwards, Z Song, C Li
Bioinformatics 2011
Variable set enrichment analysis in genome-wide association studies
W Yang, L las Fuentes, VG Dávila-Román, CC Gu
European Journal of Human Genetics 2011
Direct-to-consumer personalized genomic testing
CS Bloss, BF Darst, EJ Topol, NJ Schork
Human Molecular Genetics 2011
Overview of the Development of Personalized Genomic Medicine and Surgery
FC Brunicardi, RA Gibbs, DA Wheeler, J Nemunaitis, W Fisher, J Goss, C Chen
World Journal of Surgery 2011
Understanding the contribution of synonymous mutations to human disease
ZE Sauna, C Kimchi-Sarfaty
Nature Reviews Genetics 2011
Vaccinomics: Current Findings, Challenges and Novel Approaches for Vaccine Development
IG Ovsyannikova, GA Poland
The AAPS Journal 2011
Contemporary human genetic strategies in aging research
CS Bloss, L Pawlikowska, NJ Schork
Ageing Research Reviews 2011
Personalized medicine in rheumatoid arthritis: Miles to go before we sleep
RM Plenge, SL Bridges
Arthritis & Rheumatism 2011
Genetic analysis of biological pathway data through genomic randomization
BL Yaspan, WS Bush, ES Torstenson, D Ma, MA Pericak-Vance, MD Ritchie, JS Sutcliffe, JL Haines
Human Genetics 2011
An efficient hierarchical generalized linear mixed model for pathway analysis of genome-wide association studies
L Wang, P Jia, RD Wolfinger, X Chen, BL Grayson, TM Aune, Z Zhao
Bioinformatics 2011
Commentary: Children and Predictive Genomic Testing: Disease Prevention, Research Protection, and Our Future
BA Tarini, KP Tercyak, BS Wilfond
Journal of pediatric psychology 2011
The emerging role for rat models in gene discovery
MR Dwinell, J Lazar, AM Geurts
Mammalian Genome 2011
Gene- or region-based association study via kernel principal component analysis
Q Gao, Y He, Z Yuan, J Zhao, B Zhang, F Xue
BMC genetics 2011
Thrombotic gene polymorphisms and postoperative outcome after coronary artery bypass graft surgery
O Emiroglu, S Durdu, Y Egin, AR Akar, YD Alakoc, C Zaim, U Ozyurda, N Akar
Journal of Cardiothoracic Surgery 2011
Pharmacogenomic characterization of US FDA-approved cytotoxic drugs
EJ Peters, A Motsinger-Reif, TM Havener, L Everitt, NE Hardison, VG Watson, M Wagner, KL Richards, MA Province, HL McLeod
Pharmacogenomics 2011
Next-generation DNA sequencing-based assay for measuring allelic expression imbalance (AEI) of candidate neuropsychiatric disorder genes in human brain
X Xu, H Wang, M Zhu, Y Sun, Y Tao, Q He, J Wang, L Chen, D Saffen
BMC Genomics 2011
Genomics of human health and aging
AM Kulminski, I Culminskaya
AGE 2011
Pharmacogenomics: The genetics of variable drug responses
DM Roden, RA Wilke, HK Kroemer, CM Stein
Circulation 2011
A Systems Genetics Approach Provides a Bridge from Discovered Genetic Variants to Biological Pathways in Rheumatoid Arthritis
H Nakaoka, T Cui, A Tajima, A Oka, S Mitsunaga, K Kashiwase, Y Homma, S Sato, Y Suzuki, H Inoko, I Inoue
PloS one 2011
A Comparison of Association Methods for Cytotoxicity Mapping in Pharmacogenomics
C Brown, TM Havener, L Everitt, H McLeod, AA Motsinger-Reif
Frontiers in Genetics 2011
Statistical Optimization of Pharmacogenomics Association Studies: Key Considerations from Study Design to Analysis
BJ Grady, MD Ritchie
Current pharmacogenomics and personalized medicine 2011
Next generation genome-wide association tool: Design and coverage of a high-throughput European-optimized SNP array
TJ Hoffmann, MN Kvale, SE Hesselson, Y Zhan, C Aquino, Y Cao, S Cawley, E Chung, S Connell, J Eshragh, M Ewing, J Gollub, M Henderson, E Hubbell, C Iribarren, J Kaufman, RZ Lao, Y Lu, D Ludwig, GK Mathauda, W McGuire, G Mei, S Miles, MM Purdy, C Quesenberry, D Ranatunga, S Rowell, M Sadler, MH Shapero, L Shen, TR Shenoy, D Smethurst, SK van Eeden, L Walter, E Wan, R Wearley, T Webster, CC Wen, L Weng, RA Whitmer, A Williams, SC Wong, C Zau, A Finn, C Schaefer, PY Kwok, N Risch
Genomics 2011
An examination of SNP selection prioritisation strategies for tests of gene-gene interaction
V Moskvina, N Craddock, B Müller-Myhsok, T Kam-Thong, E Green, P Holmans, MJ Owen, MC O'Donovan
Biological Psychiatry 2011
GATES: A Rapid and Powerful Gene-Based Association Test Using Extended Simes Procedure
MX Li, HS Gui, JS Kwan, PC Sham
The American Journal of Human Genetics 2011
Risk Prediction of Complex Diseases from Family History and Known Susceptibility Loci, with Applications for Cancer Screening
HC So, JS Kwan, SS Cherny, PC Sham
The American Journal of Human Genetics 2011
Inference of Relationships in Population Data Using Identity-by-Descent and Identity-by-State
EL Stevens, G Heckenberg, ED Roberson, JD Baugher, TJ Downey, J Pevsner
PLoS genetics 2011
Genome-wide association studies of cerebral white matter lesion burden: the CHARGE Consortium
M Fornage, S Debette, JC Bis, H Schmidt, MA Ikram, C Dufouil, S Sigurdsson, T Lumley, AL DeStefano, F Fazekas, HA Vrooman, DK Shibata, P Maillard, A Zijdenbos, AV Smith, H Gudnason, R Boer, M Cushman, B Mazoyer, G Heiss, MW Vernooij, C Enzinger, NL Glazer, A Beiser, DS Knopman, M Cavalieri, WJ Niessen, TB Harris, K Petrovic, OL Lopez, R Au, JC Lambert, A Hofman, RF Gottesman, M Garcia, SR Heckbert, LD Atwood, DJ Catellier, AG Uitterlinden, Q Yang, NL Smith, T Aspelund, JR Romero, K Rice, KD Taylor, MA Nalls, JI Rotter, R Sharrett, CM van Duijn, P Amouyel, PA Wolf, V Gudnason, A der Lugt, E Boerwinkle, BM Psaty, S Seshadri, C Tzourio, MM Breteler, TH Mosley, R Schmidt, WT Longstreth, C DeCarli, LJ Launer
Annals of Neurology 2011
Personalised medicine in Canada: a survey of adoption and practice in oncology, cardiology and family medicine
K Bonter, C Desjardins, N Currier, J Pun, FD Ashbury
BMJ Open 2011
What did we learn from the genome-wide association study for tuberculosis susceptibility?
HQ Qu, Q Li, JB McCormick, SP Fisher-Hoch
Journal of medical genetics 2011
Replication and cumulative effects of GWAS-identified genetic variations for prostate cancer in Asians: a case–control study in the ChinaPCa consortium
M Wang, F Liu, AW Hsing, X Wang, Q Shao, J Qi, Y Ye, Z Wang, H Chen, X Gao, G Wang, LW Chu, Q Ding, J OuYang, X Gao, Y Huang, Y Chen, YT Gao, ZF Zhang, J Rao, R Shi, Q Wu, Y Zhang, H Jiang, J Zheng, Y Hu, L Guo, X Lin, S Tao, G Jin, J Sun, D Lu, SL Zheng, Y Sun, Z Mo, C Yin, Z Zhang, J Xu
Carcinogenesis 2011
Gene-environment interaction in psychological traits and disorders
DM Dick
Annual Review of Clinical Psychology 2011
Gene set analysis of GWAS data for human longevity highlights the relevance of the insulin/IGF-1 signaling and telomere maintenance pathways
J Deelen, HW Uh, R Monajemi, D Heemst, PE Thijssen, S Böhringer, EB van Akker, AJ de Craen, F Rivadeneira, AG Uitterlinden, RG Westendorp, JJ Goeman, PE Slagboom, JJ Houwing-Duistermaat, M Beekman
AGE 2011
Design and coverage of high throughput genotyping arrays optimized for individuals of East Asian, African American, and Latino race/ethnicity using imputation and a novel hybrid SNP selection algorithm
TJ Hoffmann, Y Zhan, MN Kvale, SE Hesselson, J Gollub, C Iribarren, Y Lu, G Mei, MM Purdy, C Quesenberry, S Rowell, MH Shapero, D Smethurst, CP Somkin, SK van Eeden, L Walter, T Webster, RA Whitmer, A Finn, C Schaefer, PY Kwok, N Risch
Genomics 2011
The eMERGE Network: A consortium of biorepositories linked to electronic medical records data for conducting genomic studies
CA McCarty, RL Chisholm, CG Chute, IJ Kullo, GP Jarvik, EB Larson, R Li, DR Masys, MD Ritchie, DM Roden, JP Struewing, WA Wolf
BMC Medical Genomics 2011
Behavioral Neurogenetics
JF Cryan, A Reif
Behavioral Neurogenetics 2011
Recent Advances in Understanding the Role of Nutrition in Human Genome Evolution
K Ye, Z Gu
Advances in nutrition (Bethesda, Md.) 2011
Siblings With Ischemic Stroke Study: Results of a Genome-Wide Scan for Stroke Loci
JF Meschia, M Nalls, M Matarin, TG Brott, RD Brown, J Hardy, B Kissela, SS Rich, A Singleton, D Hernandez, L Ferrucci, K Pearce, M Keller, BB Worrall
Stroke; a journal of cerebral circulation 2011
Post-Genomic Update on a Classical Candidate Gene for Coronary Artery Disease: ESR1
G Lucas, C Lluís-Ganella, I Subirana, M Sentí, C Willenborg, MD Musameh, SM Schwartz, CJ O'Donnell, O Melander, V Salomaa, R Elosua
Circulation. Cardiovascular genetics 2011
Identification of Cd101 as a Susceptibility Gene for Novosphingobium aromaticivorans -Induced Liver Autoimmunity
JP Mohammed, ME Fusakio, DB Rainbow, C Moule, HI Fraser, J Clark, JA Todd, LB Peterson, PB Savage, M Wills-Karp, WM Ridgway, LS Wicker, J Mattner
Journal of immunology (Baltimore, Md. : 1950) 2011
Long Intergenic Noncoding RNAs: New Links in Cancer Progression: Figure 1
MC Tsai, RC Spitale, HY Chang
Cancer research 2011
Giving and withholding of information following genomic screening: challenges identified in a study of primary care physicians in Estonia.
Leitsalu L, Hercher L, Metspalu A
Journal of Genetic Counseling 2011
Construction of Japanese BAC library Yamato-2 (JY2): a set of 330K clone resources of damage-minimized DNA taken from a genetically established Japanese individual.
Terabayashi Y, Morita K, Park JY, Saito S, Shiina T, Inoko H, Ishiwata I, Fujimori KE, Hirano T
Human Cell 2011
An application and empirical comparison of statistical analysis methods for associating rare variants to a complex phenotype.
Bansal V, Libiger O, Torkamani A, Schork NJ
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2011
An Interdisciplinary Approach to Studying Gene–Environment Interactions: From Twin Studies to Gene Identification and Back
Dick DM
Research in Human Development 2011
Genome-wide association studies and genetic risk assessment of liver diseases
M Krawczyk, R Müllenbach, SN Weber, V Zimmer, F Lammert
Nature Reviews Gastroenterology & Hepatology 2010
Molecular diagnostics in transplantation
M Naesens, MM Sarwal
Nature Reviews Nephrology 2010
Quantitative analyses link modulation of sonic hedgehog signaling to continuous variation in facial growth and shape
NM Young, HJ Chong, D Hu, B Hallgrímsson, RS Marcucio
Development (Cambridge, England) 2010
Investigation of Variants Identified in Caucasian Genome-Wide Association Studies for Plasma High-Density Lipoprotein Cholesterol and Triglycerides Levels in Mexican Dyslipidemic Study Samples
D Weissglas-Volkov, CA Aguilar-Salinas, JS Sinsheimer, L Riba, A Huertas-Vazquez, ML Ordoñez-Sánchez, R Rodriguez-Guillen, R M., T Tusie-Luna, P Pajukanta
Circulation. Cardiovascular genetics 2010
The molecular pathology of cancer
TJ Harris, F McCormick
Nature Reviews Clinical Oncology 2010
Human genetics of diabetic retinopathy: current perspectives
DP Ng
Journal of Ophthalmology 2010
A knowledge-based weighting framework to boost the power of genome-wide association studies
MX Li, PC Sham, SS Cherny, YQ Song
PloS one 2010
Estimating the total number of susceptibility variants underlying complex diseases from genome-wide association studies
HC So, BH Yip, PC Sham
PloS one 2010
Breast cancer in the personal genomics era
RE Ellsworth, DJ Decewicz, CD Shriver, DL Ellsworth
Current genomics 2010
Being more realistic about the public health impact of genomic medicine
WD Hall, R Mathews, KI Morley
PLoS Medicine 2010
Genetic and molecular functional characterization of variants within TNFSF13B, a positional candidate preeclampsia susceptibility gene on 13q
MH Fenstad, MP Johnson, LT Roten, PA Aas, S Forsmo, K Klepper, CE East, LJ Abraham, J Blangero, SP Brennecke, R Austgulen, EK Moses
PloS one 2010
Quality, quantity and harmony: the DataSHaPER approach to integrating data across bioclinical studies
I Fortier, PR Burton, PJ Robson, V Ferretti, J Little, F L'Heureux, M Deschênes, BM Knoppers, D Doiron, JC Keers, P Linksted, JR Harris, G Lachance, C Boileau, NL Pedersen, CM Hamilton, K Hveem, MJ Borugian, RP Gallagher, J McLaughlin, L Parker, JD Potter, J Gallacher, R Kaaks, B Liu, T Sprosen, A Vilain, SA Atkinson, A Rengifo, R Morton, A Metspalu, HE Wichmann, M Tremblay, RL Chisholm, A Garcia-Montero, H Hillege, JE Litton, LJ Palmer, M Perola, BH Wolffenbuttel, L Peltonen, TJ Hudson
International Journal of Epidemiology 2010
Do alterations in mitochondrial DNA play a role in breast carcinogenesis?
TE Rohan, LJ Wong, T Wang, J Haines, GC Kabat
Journal of Oncology 2010
Analyze multivariate phenotypes in genetic association studies by combining univariate association tests
Q Yang, H Wu, CY Guo, CS Fox
Genetic Epidemiology 2010
Insights into colon cancer etiology via a regularized approach to gene set analysis of GWAS data
LS Chen, CM Hutter, JD Potter, Y Liu, RL Prentice, U Peters, L Hsu
The American Journal of Human Genetics 2010
An Environment-Wide Association Study (EWAS) on type 2 diabetes mellitus
CJ Patel, J Bhattacharya, AJ Butte
PloS one 2010
Evaluating the transferability of Hapmap SNPs to a Singapore Chinese population
AK Andiappan, R Anantharaman, PP Nilkanth, DY Wang, FT Chew
BMC genetics 2010
Interpretation of association signals and identification of causal variants from genome-wide association studies
K Wang, SP Dickson, CA Stolle, ID Krantz, DB Goldstein, H Hakonarson
The American Journal of Human Genetics 2010
Curve-based multivariate distance matrix regression analysis: application to genetic association analyses involving repeated measures
RM Salem, DT O'Connor, NJ Schork
Physiological genomics 2010
FAM-MDR: a flexible family-based multifactor dimensionality reduction technique to detect epistasis using related individuals
T Cattaert, V Urrea, AC Naj, LD Lobel, VD Wit, M Fu, JM John, H Shen, ML Calle, MD Ritchie, TL Edwards, KV Steen
PloS one 2010
Genome-wide association studies in diverse populations
NA Rosenberg, L Huang, EM Jewett, ZA Szpiech, I Jankovic, M Boehnke
Nature reviews. Genetics 2010
Chromosome 9p21 SNPs Associated with Multiple Disease Phenotypes Correlate with ANRIL Expression
MS Cunnington, MS Koref, BM Mayosi, J Burn, B Keavney
PLoS genetics 2010
Anonymization of electronic medical records for validating genome-wide association studies
G Loukides, A Gkoulalas-Divanis, B Malin
Proceedings of the National Academy of Sciences 2010
Polymorphisms in genes of interleukin 12 and its receptors and their association with protection against severe malarial anaemia in children in western Kenya
L Zhang, D Prather, JV Eng, S Crawford, S Kariuki, F Kuile, D Terlouw, B Nahlen, AA Lal, L Slutsker, V Udhayakumar, YP Shi
Malaria Journal 2010
Genetics of focal segmental glomerulosclerosis and human immunodeficiency virus-associated collapsing glomerulopathy: the role of MYH9 genetic variation
CA Winkler, G Nelson, TK Oleksyk, MB Nava, JB Kopp
Seminars in Nephrology 2010
Genotype-based risk and pharmacogenetic sampling in clinical trials
NJ Schork, EJ Topol
Journal of Biopharmaceutical Statistics 2010
Performance of common genetic variants in breast-cancer risk models
S Wacholder, P Hartge, R Prentice, M Garcia-Closas, HS Feigelson, WR Diver, MJ Thun, DG Cox, SE Hankinson, P Kraft, B Rosner, CD Berg, LA Brinton, J Lissowska, ME Sherman, R Chlebowski, C Kooperberg, RD Jackson, DW Buckman, P Hui, R Pfeiffer, KB Jacobs, GD Thomas, RN Hoover, MH Gail, SJ Chanock, DJ Hunter
The New England journal of medicine 2010
Replication of past candidate loci for common diseases and phenotypes in 100 genome-wide association studies
KC Siontis, NA Patsopoulos, JP Ioannidis
European journal of human genetics : EJHG 2010
Family-based genetic risk prediction of multifactorial disease
DM Ruderfer, J Korn, SM Purcell
Genome Medicine 2010
What role for genetics in the prediction of multiple sclerosis?
S Sawcer, M Ban, J Wason, F Dudbridge
Annals of Neurology 2010
Genetics of psychiatric disorders methods: molecular approaches
D Avramopoulos
The Psychiatric clinics of North America 2010
Genetic and functional dissection of HTRA1 and LOC387715 in age-related macular degeneration
Z Yang, Z Tong, Y Chen, J Zeng, F Lu, X Sun, C Zhao, K Wang, L Davey, H Chen, N London, D Muramatsu, F Salasar, R Carmona, D Kasuga, X Wang, M Bedell, M Dixie, P Zhao, R Yang, D Gibbs, X Liu, Y Li, C Li, Y Li, B Campochiaro, R Constantine, DJ Zack, P Campochiaro, Y Fu, DY Li, N Katsanis, K Zhang
PLoS genetics 2010
Efficient evaluation of ranking procedures when the number of units is large, with application to SNP identification
TA Louis, I Ruczinski
Biometrical journal. Biometrische Zeitschrift 2010
Bioinformatics challenges for genome-wide association studies
JH Moore, FW Asselbergs, SM Williams
Bioinformatics (Oxford, England) 2010
The genetics of ischaemic stroke
M Matarin, A Singleton, J Hardy, J Meschia
Journal of Internal Medicine 2010
Methodological challenges of genome-wide association analysis in Africa
YY Teo, KS Small, DP Kwiatkowski
Nature Reviews Genetics 2010
Obstructive Sleep Apnoea: From pathogenesis to treatment: Current controversies and future directions
PR EASTWOOD, A MALHOTRA, LJ PALMER, EJ KEZIRIAN, RL HORNER, MS IP, R THURNHEER, NA ANTIC, DR HILLMAN
Respirology 2010
Genome-wide association study of recurrent early-onset major depressive disorder
J Shi, JB Potash, JA Knowles, MM Weissman, W Coryell, WA Scheftner, WB Lawson, JR DePaulo, PV Gejman, AR Sanders, JK Johnson, P Adams, S Chaudhury, D Jancic, O Evgrafov, A Zvinyatskovskiy, N Ertman, M Gladis, K Neimanas, M Goodell, N Hale, N Ney, R Verma, D Mirel, P Holmans, DF Levinson
Molecular Psychiatry 2010
MicroRNAs: Potential biomarkers in cancer
GP George, RD Mittal
Indian Journal of Clinical Biochemistry 2010
Analyzing complex traits with congenic strains
H Shao, DS Sinasac, LC Burrage, CA Hodges, PJ Supelak, MR Palmert, C Moreno, AW Cowley, HJ Jacob, JH Nadeau
Mammalian Genome 2010
Conference Scene: The great debate: genome-wide association studies in pharmacogenetics research, good or bad?
KR Bailey, C Cheng
Pharmacogenomics 2010
Statistical analysis strategies for association studies involving rare variants
V Bansal, O Libiger, A Torkamani, NJ Schork
Nature Reviews Genetics 2010
Pioneering First Steps and Cautious Conclusions
FJ McMahon
Biological Psychiatry 2010
Exploring genetic susceptibility to cancer in diverse populations
CA Haiman, DO Stram
Current Opinion in Genetics & Development 2010
Individualized medicine 2010
HE Blum
Journal of Cellular and Molecular Medicine 2010
Knowledge gaining by human genetic studies on tuberculosis susceptibility
HQ Qu, SP Fisher-Hoch, JB McCormick
Journal of Human Genetics 2010
Using ancestry matching to combine family-based and unrelated samples for genome-wide association studies
A Crossett, BP Kent, L Klei, S Ringquist, M Trucco, K Roeder, B Devlin
Statistics in Medicine 2010
Future Health Applications of Genomics
CM McBride, D Bowen, LC Brody, CM Condit, RT Croyle, M Gwinn, MJ Khoury, LM Koehly, BR Korf, TM Marteau, K McLeroy, K Patrick, TW Valente
American Journal of Preventive Medicine 2010
Common Variants Near Melanocortin 4 Receptor Are Associated with General and Visceral Adiposity in European- and African-American Youth
G Liu, H Zhu, V Lagou, B Gutin, P Barbeau, FA Treiber, Y Dong, H Snieder
The Journal of Pediatrics 2010
Advances in the genetics of endometriosis
EC Dun, RN Taylor, F Wieser
Genome Medicine 2010
Human Behavioral Informatics in Genetic Studies of Neuropsychiatric Disease: Multivariate Profile-Based Analysis
CS Bloss, KM Schiabor, NJ Schork
Brain Research Bulletin 2010
DataSHIELD: resolving a conflict in contemporary bioscience—performing a pooled analysis of individual-level data without sharing the data
M Wolfson, SE Wallace, N Masca, G Rowe, NA Sheehan, V Ferretti, P LaFlamme, MD Tobin, J Macleod, J Little, I Fortier, BM Knoppers, PR Burton
International Journal of Epidemiology 2010
Gene variants associated with schizophrenia in a Norwegian genome-wide study are replicated in a large European cohort
L Athanasiu, M Mattingsdal, AK Kähler, A Brown, O Gustafsson, I Agartz, I Giegling, P Muglia, S Cichon, M Rietschel, OP Pietiläinen, L Peltonen, E Bramon, D Collier, DS Clair, E Sigurdsson, H Petursson, D Rujescu, I Melle, VM Steen, S Djurovic, OA Andreassen
Journal of Psychiatric Research 2010
From GWAS to the clinic: risk factors for intracranial aneurysms
YM Ruigrok, GJ Rinkel
Genome Medicine 2010
Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease
IJ Kullo, J Fan, J Pathak, GK Savova, Z Ali, CG Chute
Journal of the American Medical Informatics Association : JAMIA 2010
Genomics for Disease Treatment and Prevention
CS Bloss, DV Jeste, NJ Schork
The Psychiatric clinics of North America 2010
A detailed view on Model-Based Multifactor Dimensionality Reduction for detecting gene-gene interactions in case-control data in the absence and presence of noise
T Cattaert, ML Calle, SM Dudek, JM John, FV Lishout, V Urrea, MD Ritchie, KV Steen
Annals of Human Genetics 2010
Direct-to-Consumer Genetic and Genomic Testing: Preparing Nurse Practitioners for Genomic Healthcare
JT Loud
The journal for nurse practitioners : JNP 2010
SNPTransformer: A Lightweight Toolkit for Genome-Wide Association Studies
C Dong
Genomics Proteomics & Bioinformatics 2010
Power analysis for case-control association studies of samples with known family histories
B Peng, B Li, Y Han, CI Amos
Humangenetik 2010
Two-stage case-control designs for rare genetic variants
DJ Schaid, JP Sinnwell
Humangenetik 2010
Asthma-susceptibility variants identified using probands in case-control and family-based analyses
BE Himes, J Lasky-Su, AC Wu, JB Wilk, GM Hunninghake, B Klanderman, AJ Murphy, R Lazarus, ME Soto-Quiros, L Avila, JC Celedón, C Lange, GT O'Connor, BA Raby, EK Silverman, ST Weiss
BMC Medical Genetics 2010
Laboratory Mouse Models for the Human Genome-Wide Associations
GD Kitsios, N Tangri, PJ Castaldi, JP Ioannidis, AE Toland
PloS one 2010
Genetic Variation of DKK3 May Modify Renal Disease Severity in ADPKD
M Liu, S Shi, S Senthilnathan, J Yu, E Wu, C Bergmann, K Zerres, N Bogdanova, E Coto, C Deltas, A Pierides, K Demetriou, O Devuyst, B Gitomer, M Laakso, A Lumiaho, K Lamnissou, R Magistroni, P Parfrey, M Breuning, DJ Peters, R Torra, CG Winearls, VE Torres, PC Harris, AD Paterson, Y Pei
Journal of the American Society of Nephrology : JASN 2010
Meta-analysis of genome-wide association data identifies a risk locus for major mood disorders on 3p21.1.
McMahon FJ, Akula N, Schulze TG, Muglia P, Tozzi F, Detera-Wadleigh SD, Steele CJ, Breuer R, Strohmaier J, Wendland JR, Mattheisen M, Mühleisen TW, Maier W, Nöthen MM, Cichon S, Farmer A, Vincent JB, Holsboer F, Preisig M, Rietschel M
Nature Genetics 2010
Explaining inter-individual variability in phenotype: is epigenetics up to the challenge?
Turan N, Katari S, Coutifaris C, Sapienza C
Epigenetics : official journal of the DNA Methylation Society 2010
Child and adolescent psychiatric genetics.
Hebebrand J, Scherag A, Schimmelmann BG, Hinney A
European Child & Adolescent Psychiatry 2010
A genome-wide association study of amygdala activation in youths with and without bipolar disorder.
Liu X, Akula N, Skup M, Brotman MA, Leibenluft E, McMahon FJ
Journal of the American Academy of Child and Adolescent Psychiatry 2010
Uncovering the roles of rare variants in common disease through whole-genome sequencing.
Cirulli ET, Goldstein DB
Nature reviews. Genetics 2010
Evaluation of association of HNF1B variants with diverse cancers: collaborative analysis of data from 19 genome-wide association studies.
Elliott KS, Zeggini E, McCarthy MI, Gudmundsson J, Sulem P, Stacey SN, Thorlacius S, Amundadottir L, Grönberg H, Xu J, Gaborieau V, Eeles RA, Neal DE, Donovan JL, Hamdy FC, Muir K, Hwang SJ, Spitz MR, Zanke B, Carvajal-Carmona L, Brown KM, Hayward NK, Macgregor S, Tomlinson IP, Lemire M, Amos CI, Murabito JM, Isaacs WB, Easton DF, Brennan P, Barkardottir RB, Gudbjartsson DF, Rafnar T, Hunter DJ, Chanock SJ, Stefansson K, Ioannidis JP
PloS one 2010
CLIA-tested Genetic Variants on Commercial SNP Arrays: Potential for Incidental Findings in Genome-Wide Association Studies
Johnson AD, Bhimavarapu A, Benjamin EJ, Fox C, Levy D, Jarvik GP, O\u2019Donnell CJ
Genetics in Medicine 2010
Quality control and quality assurance in genotypic data for genome-wide association studies
Laurie CC, Doheny KF, Mirel DB, Pugh EW, Bierut LJ, Bhangale T, Boehm F, Caporaso NE, Cornelis MC, Edenberg HJ, Gabriel SB, Harris EL, Hu FB, Jacobs K, Kraft P, Landi MT, Lumley T, Manolio TA, McHugh C, Painter I, Paschall J, Rice JP, Rice KM, Zheng X, Weir BS
Genetic Epidemiology 2010
Were genome-wide linkage studies a waste of time? Exploiting candidate regions within genome-wide association studies.
Yoo YJ, Bull SB, Paterson AD, Waggott D, Sun L
Genetic Epidemiology 2010
Statistical significance in genetic association studies.
Qu HQ, Tien M, Polychronakos C
Clinical and Investigative Medicine. Medecine Clinique et Experimentale 2010
Analysing biological pathways in genome-wide association studies.
Wang K, Li M, Hakonarson H
Nature reviews. Genetics 2010
Can Lessons Learned from Genome-Wide Research be Applied to Nutrition-Wide and Exposure-Wide Evidence?
Ioannidis JP
Critical Reviews in Food Science and Nutrition 2010
Pulmonary surfactant: an immunological perspective
ZC Chroneos, Z Sever-Chroneos, VL Shepherd
Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2009
Cis-regulatory mutations in human disease
DJ Epstein
Briefings in functional genomics & proteomics 2009
Modeling molecular and cellular aspects of human disease using the nematode Caenorhabditis elegans
GA Silverman, CJ Luke, SR Bhatia, OS Long, AC Vetica, DH Perlmutter, SC Pak
Pediatric Research 2009
Genome-wide association studies--a summary for the clinical gastroenterologist
E Melum, A Franke, TH Karlsen
World journal of gastroenterology : WJG 2009
Common genetic variants in sudden cardiac death
AL George
Heart rhythm : the official journal of the Heart Rhythm Society 2009
Pathway analysis of GWAS provides new insights into genetic susceptibility to 3 inflammatory diseases
H Eleftherohorinou, V Wright, C Hoggart, AL Hartikainen, MR Jarvelin, D Balding, L Coin, M Levin
PloS one 2009
Influence of microbial environment on autoimmunity
AV Chervonsky
Nature Immunology 2009
Genetics and the general physician: insights, applications and future challenges
JC Knight
QJM : monthly journal of the Association of Physicians 2009
MicroRNA polymorphisms: the future of pharmacogenomics, molecular epidemiology and individualized medicine
PJ Mishra, JR Bertino
Pharmacogenomics 2009
MicroRNA polymorphisms: a giant leap towards personalized medicine
PJ Mishra
Personalized Medicine 2009
Replication in genome-wide association studies
P Kraft, E Zeggini, JP Ioannidis
Statistical science : a review journal of the Institute of Mathematical Statistics 2009
Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies
SI Shyn, J Shi, JB Kraft, JB Potash, JA Knowles, MM Weissman, HA Garriock, JS Yokoyama, PJ McGrath, EJ Peters, WA Scheftner, W Coryell, WB Lawson, D Jancic, PV Gejman, AR Sanders, P Holmans, SL Slager, DF Levinson, SP Hamilton
Molecular Psychiatry 2009
Ethical data release in genome-wide association studies in developing countries
M Parker, SJ Bull, J Vries, T Agbenyega, OK Doumbo, DP Kwiatkowski
PLoS Medicine 2009
The genetics of Tourette syndrome: a review
JA O'Rourke, JM Scharf, D Yu, DL Pauls
Journal of Psychosomatic Research 2009
Genome-wide association studies in cancer--current and future directions
CC Chung, WC Magalhaes, J Gonzalez-Bosquet, SJ Chanock
Carcinogenesis 2009
Repertoires of the nucleosome-positioning dinucleotides
T Bettecken, EN Trifonov
PloS one 2009
Genome-scale approaches to the epigenetics of common human disease
AP Feinberg
Virchows Archiv : an international journal of pathology 2009
Beyond proof of principle: new genes for Alzheimer's disease through collaboration
MA Pericak-Vance, JL Haines
Lancet neurology 2009
Information management to enable personalized medicine: stakeholder roles in building clinical decision support
GJ Downing, SN Boyle, KM Brinner, JA Osheroff
BMC medical informatics and decision making 2009
Control of fetal hemoglobin: new insights emerging from genomics and clinical implications
SL Thein, S Menzel, M Lathrop, C Garner
Human Molecular Genetics 2009
Transgenerational genetic effects on phenotypic variation and disease risk
JH Nadeau
Human Molecular Genetics 2009
A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies
KB Jacobs, M Yeager, S Wacholder, D Craig, P Kraft, DJ Hunter, J Paschal, TA Manolio, M Tucker, RN Hoover, GD Thomas, SJ Chanock, N Chatterjee
Nature Genetics 2009
Genome-wide association studies: hypothesis-"free" or "engaged"?
GD Kitsios, E Zintzaras
Translational research : the journal of laboratory and clinical medicine 2009
Hypothesis-driven candidate gene association studies: practical design and analytical considerations
TJ Jorgensen, I Ruczinski, B Kessing, MW Smith, YY Shugart, AJ Alberg
American Journal of Epidemiology 2009
Predicting response to short-acting bronchodilator medication using Bayesian networks
BE Himes, AC Wu, QL Duan, B Klanderman, AA Litonjua, K Tantisira, MF Ramoni, ST Weiss
Pharmacogenomics 2009
Genome-wide association studies for atherosclerotic vascular disease and its risk factors
K Ding, IJ Kullo
Circulation. Cardiovascular genetics 2009
Genetic scoring analysis: a way forward in genome wide association studies?
N Amin, CM van Duijn, AC Janssens
European Journal of Epidemiology 2009
Visualization of shared genomic regions and meiotic recombination in high-density SNP data
ED Roberson, J Pevsner
PloS one 2009
Systematic haplotype analysis resolves a complex plasma plant sterol locus on the Micronesian Island of Kosrae
EE Kenny, A Gusev, K Riegel, D Lütjohann, JK Lowe, J Salit, JB Maller, M Stoffel, MJ Daly, DM Altshuler, JM Friedman, JL Breslow, I Pe'er, E Sehayek
Proceedings of the National Academy of Sciences 2009
Comprehensive resequence analysis of a 97 kb region of chromosome 10q11.2 containing the MSMB gene associated with prostate cancer
M Yeager, Z Deng, J Boland, C Matthews, J Bacior, V Lonsberry, A Hutchinson, LA Burdett, L Qi, KB Jacobs, J Gonzalez-Bosquet, SI Berndt, RB Hayes, RN Hoover, G Thomas, DJ Hunter, M Dean, SJ Chanock
Human Genetics 2009
The HapMap and genome-wide association studies in diagnosis and therapy
TA Manolio, FS Collins
Annual Review of Medicine 2009
Underlying genetic models of inheritance in established type 2 diabetes associations
G Salanti, L Southam, D Altshuler, K Ardlie, I Barroso, M Boehnke, MC Cornelis, TM Frayling, H Grallert, N Grarup, L Groop, T Hansen, AT Hattersley, FB Hu, K Hveem, T Illig, J Kuusisto, M Laakso, C Langenberg, V Lyssenko, MI McCarthy, A Morris, AD Morris, CN Palmer, F Payne, CG Platou, LJ Scott, BF Voight, NJ Wareham, E Zeggini, JP Ioannidis
American Journal of Epidemiology 2009
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data
RS Vasan, NL Glazer, JF Felix, W Lieb, PS Wild, SB Felix, N Watzinger, MG Larson, NL Smith, A Dehghan, A Grosshennig, A Schillert, A Teumer, R Schmidt, S Kathiresan, T Lumley, YS Aulchenko, IR König, T Zeller, G Homuth, M Struchalin, J Aragam, JC Bis, F Rivadeneira, J Erdmann, RB Schnabel, M Dörr, R Zweiker, L Lind, RJ Rodeheffer, KH Greiser, D Levy, T Haritunians, JW Deckers, J Stritzke, KJ Lackner, U Völker, E Ingelsson, I Kullo, J Haerting, CJ O'Donnell, SR Heckbert, BH Stricker, A Ziegler, T Reffelmann, MM Redfield, K Werdan, GF Mitchell, K Rice, DK Arnett, A Hofman, JS Gottdiener, AG Uitterlinden, T Meitinger, M Blettner, N Friedrich, TJ Wang, BM Psaty, CM van Duijn, HE Wichmann, TF Munzel, HK Kroemer, EJ Benjamin, JI Rotter, JC Witteman, H Schunkert, H Schmidt, H Völzke, S Blankenberg
JAMA : the journal of the American Medical Association 2009
Common variants on chromosome 6p22.1 are associated with schizophrenia
J Shi, DF Levinson, J Duan, AR Sanders, Y Zheng, I Pe'er, F Dudbridge, PA Holmans, AS Whittemore, BJ Mowry, A Olincy, F Amin, CR Cloninger, JM Silverman, NG Buccola, WF Byerley, DW Black, RR Crowe, JR Oksenberg, DB Mirel, KS Kendler, R Freedman, PV Gejman
Nature 2009
Complex diseases, complex genes: keeping pathways on the right track
P Kraft, S Raychaudhuri
Epidemiology (Cambridge, Mass.) 2009
Genome-wide association studies, field synopses, and the development of the knowledge base on genetic variation and human diseases
MJ Khoury, L Bertram, P Boffetta, AS Butterworth, SJ Chanock, SM Dolan, I Fortier, M Garcia-Closas, M Gwinn, JP Higgins, AC Janssens, J Ostell, RP Owen, RA Pagon, TR Rebbeck, N Rothman, JL Bernstein, PR Burton, H Campbell, A Chockalingam, H Furberg, J Little, TR O'Brien, D Seminara, P Vineis, DM Winn, W Yu, JP Ioannidis
American Journal of Epidemiology 2009
Designing genome-wide association studies: sample size, power, imputation, and the choice of genotyping chip
CC Spencer, Z Su, P Donnelly, J Marchini
PLoS genetics 2009
Genome-wide association study of bipolar disorder in European American and African American individuals
EN Smith, CS Bloss, JA Badner, T Barrett, PL Belmonte, W Berrettini, W Byerley, W Coryell, D Craig, HJ Edenberg, E Eskin, T Foroud, E Gershon, TA Greenwood, M Hipolito, DL Koller, WB Lawson, C Liu, F Lohoff, MG McInnis, FJ McMahon, DB Mirel, SS Murray, C Nievergelt, J Nurnberger, EA Nwulia, J Paschall, JB Potash, J Rice, TG Schulze, W Scheftner, C Panganiban, N Zaitlen, PP Zandi, S Zöllner, NJ Schork, JR Kelsoe
Molecular Psychiatry 2009
Role of GABRA2 in trajectories of externalizing behavior across development and evidence of moderation by parental monitoring
DM Dick, SJ Latendresse, JE Lansford, JP Budde, A Goate, KA Dodge, GS Pettit, JE Bates
Archives of general psychiatry 2009
Common vs. rare allele hypotheses for complex diseases
NJ Schork, SS Murray, KA Frazer, EJ Topol
Current Opinion in Genetics & Development 2009
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
LA Hindorff, P Sethupathy, HA Junkins, EM Ramos, JP Mehta, FS Collins, TA Manolio
Proceedings of the National Academy of Sciences 2009
The A's, G's, C's, and T's of health disparities
E Ramos, C Rotimi
BMC Medical Genomics 2009
Discovery of rare variants via sequencing: implications for the design of complex trait association studies
B Li, SM Leal
PLoS genetics 2009
Genome-wide association study of blood pressure and hypertension
D Levy, GB Ehret, K Rice, GC Verwoert, LJ Launer, A Dehghan, NL Glazer, AC Morrison, AD Johnson, T Aspelund, Y Aulchenko, T Lumley, A Köttgen, RS Vasan, F Rivadeneira, G Eiriksdottir, X Guo, DE Arking, GF Mitchell, FU Mattace-Raso, AV Smith, K Taylor, RB Scharpf, SJ Hwang, EJ Sijbrands, J Bis, TB Harris, SK Ganesh, CJ O'Donnell, A Hofman, JI Rotter, J Coresh, EJ Benjamin, AG Uitterlinden, G Heiss, CS Fox, JC Witteman, E Boerwinkle, TJ Wang, V Gudnason, MG Larson, A Chakravarti, BM Psaty, CM van Duijn
Nature Genetics 2009
Genome-wide association analysis identifies PDE4D as an asthma-susceptibility gene
BE Himes, GM Hunninghake, JW Baurley, NM Rafaels, P Sleiman, DP Strachan, JB Wilk, SA Willis-Owen, B Klanderman, J Lasky-Su, R Lazarus, AJ Murphy, ME Soto-Quiros, L Avila, T Beaty, RA Mathias, I Ruczinski, KC Barnes, JC Celedón, WO Cookson, WJ Gauderman, FD Gilliland, H Hakonarson, C Lange, MF Moffatt, GT O'Connor, BA Raby, EK Silverman, ST Weiss
The American Journal of Human Genetics 2009
Personalized medicine: a transformative approach is needed
TJ Hudson
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne 2009
The genetic signatures of noncoding RNAs
JS Mattick
PLoS genetics 2009
Fine mapping and functional analysis of a common variant in MSMB on chromosome 10q11.2 associated with prostate cancer susceptibility
H Lou, M Yeager, H Li, JG Bosquet, RB Hayes, N Orr, K Yu, A Hutchinson, KB Jacobs, P Kraft, S Wacholder, N Chatterjee, HS Feigelson, MJ Thun, WR Diver, D Albanes, J Virtamo, S Weinstein, J Ma, JM Gaziano, M Stampfer, FR Schumacher, E Giovannucci, G Cancel-Tassin, O Cussenot, A Valeri, GL Andriole, ED Crawford, SK Anderson, M Tucker, RN Hoover, JF Fraumeni, G Thomas, DJ Hunter, M Dean, SJ Chanock
Proceedings of the National Academy of Sciences 2009
Imaging phenotypes of major depressive disorder: genetic correlates
JB Savitz, WC Drevets
Neuroscience 2009
Systems pharmacology and genome medicine: a future perspective
AD Wist, SI Berger, R Iyengar
Genome Medicine 2009
Genome-based prediction of common diseases: methodological considerations for future research
AC Janssens, CM van Duijn
Genome Medicine 2009
Psychosis genetics: modeling the relationship between schizophrenia, bipolar disorder, and mixed (or "schizoaffective") psychoses
N Craddock, MC O'Donovan, MJ Owen
Schizophrenia Bulletin 2009
Common variants at ten loci modulate the QT interval duration in the QTSCD Study
A Pfeufer, S Sanna, DE Arking, M Müller, V Gateva, C Fuchsberger, GB Ehret, M Orrú, C Pattaro, A Köttgen, S Perz, G Usala, M Barbalic, M Li, B Pütz, A Scuteri, RJ Prineas, MF Sinner, C Gieger, SS Najjar, WH Kao, TW Mühleisen, M Dei, C Happle, S Möhlenkamp, L Crisponi, R Erbel, KH Jöckel, S Naitza, G Steinbeck, F Marroni, AA Hicks, E Lakatta, B Müller-Myhsok, PP Pramstaller, HE Wichmann, D Schlessinger, E Boerwinkle, T Meitinger, M Uda, J Coresh, S Kääb, GR Abecasis, A Chakravarti
Nature Genetics 2009
Discovering novel risk factors for venous thrombosis: a candidate-gene approach
NL Smith, KM Rice, T Lumley, SR Heckbert, BM Psaty
Thrombosis Research 2009
Genome-wide association study of smoking initiation and current smoking
JM Vink, AB Smit, EJ de Geus, P Sullivan, G Willemsen, JJ Hottenga, JH Smit, WJ Hoogendijk, FG Zitman, L Peltonen, J Kaprio, NL Pedersen, PK Magnusson, TD Spector, KO Kyvik, KI Morley, AC Heath, NG Martin, RG Westendorp, PE Slagboom, H Tiemeier, A Hofman, AG Uitterlinden, YS Aulchenko, N Amin, C Duijn, BW Penninx, DI Boomsma
The American Journal of Human Genetics 2009
Genomewide linkage scan of schizophrenia in a large multicenter pedigree sample using single nucleotide polymorphisms
PA Holmans, B Riley, AE Pulver, MJ Owen, DB Wildenauer, PV Gejman, BJ Mowry, C Laurent, KS Kendler, G Nestadt, NM Williams, SG Schwab, AR Sanders, D Nertney, J Mallet, B Wormley, VK Lasseter, MC O'Donovan, J Duan, M Albus, M Alexander, S Godard, R Ribble, KY Liang, N Norton, W Maier, G Papadimitriou, D Walsh, M Jay, A O'Neill, FB Lerer, D Dikeos, RR Crowe, JM Silverman, DF Levinson
Molecular Psychiatry 2009
Recent advances in genetic predisposition to clinical acute lung injury
L Gao, KC Barnes
American journal of physiology. Lung cellular and molecular physiology 2009
Collaborative genome-wide association studies of diverse diseases: programs of the NHGRI's office of population genomics
TA Manolio
Pharmacogenomics 2009
Meta-analysis in genome-wide association studies
E Zeggini, JP Ioannidis
Pharmacogenomics 2009
An open access database of genome-wide association results
AD Johnson, CJ O'Donnell
BMC Medical Genetics 2009
Genetic background comparison using distance-based regression, with applications in population stratification evaluation and adjustment
Q Li, S Wacholder, DJ Hunter, RN Hoover, S Chanock, G Thomas, K Yu
Genetic Epidemiology 2009
MEIS1 intronic risk haplotype associated with restless legs syndrome affects its mRNA and protein expression levels
L Xiong, H Catoire, P Dion, C Gaspar, RG Lafrenière, SL Girard, A Levchenko, JB Rivière, L Fiori, J St-Onge, I Bachand, P Thibodeau, R Allen, C Earley, G Turecki, J Montplaisir, GA Rouleau
Human Molecular Genetics 2009
Detecting shared pathogenesis from the shared genetics of immune-related diseases
A Zhernakova, CC van Diemen, C Wijmenga
Nature Reviews Genetics 2009
Dissecting the phenotype in genome-wide association studies of psychiatric illness
N Craddock, K Kendler, M Neale, J Nurnberger, S Purcell, M Rietschel, R Perlis, SL Santangelo, T Schulze, JW Smoller, A Thapar
The British Journal of Psychiatry 2009
Genome-wide association studies in ADHD
B Franke, BM Neale, SV Faraone
Human Genetics 2009
Large-scale analysis of association betweenGDF5andFRZBvariants and osteoarthritis of the hip, knee, and hand
E Evangelou, K Chapman, I Meulenbelt, FB Karassa, J Loughlin, A Carr, M Doherty, S Doherty, JJ Gómez-Reino, A Gonzalez, BV Halldorsson, VB Hauksson, A Hofman, DJ Hart, S Ikegawa, T Ingvarsson, Q Jiang, I Jonsdottir, H Jonsson, HJ Kerkhof, M Kloppenburg, NE Lane, J Li, RJ Lories, JB van Meurs, A Näkki, MC Nevitt, J Rodriguez-Lopez, D Shi, PE Slagboom, K Stefansson, A Tsezou, GA Wallis, CM Watson, TD Spector, AG Uitterlinden, AM Valdes, JP Ioannidis
Arthritis & Rheumatism 2009
High marks for GWAS
S Chanock
Nature Genetics 2009
Genetics and Genomics of Chronic Obstructive Pulmonary Disease
EK Silverman, A Spira, PD Paré
Proceedings of the American Thoracic Society 2009
Genomewide Association Studies and Human Disease
J Hardy, A Singleton
The New England journal of medicine 2009
Genomewide association studies: history, rationale, and prospects for psychiatric disorders
, S Cichon, N Craddock, M Daly, SV Faraone, PV Gejman, J Kelsoe, T Lehner, DF Levinson, A Moran, P Sklar, PF Sullivan
The American journal of psychiatry 2009
Genetic susceptibility in Parkinson's disease
JM Bras, A Singleton
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 2009
Emerging Paradigms in Cancer Genetics: Some Important Findings from High-Density Single Nucleotide Polymorphism Array Studies
MD Bacolod, GS Schemmann, SF Giardina, P Paty, DA Notterman, F Barany
Cancer research 2009
LD-Spline: Mapping SNPs on genotyping platforms to genomic regions using patterns of linkage disequilibrium
WS Bush, G Chen, ES Torstenson, MD Ritchie
BioData mining 2009
The search for genetic polymorphisms in the homocysteine/folate pathway that contribute to the etiology of human neural tube defects
AM Molloy, LC Brody, JL Mills, JM Scott, PN Kirke
Birth defects research. Part A, Clinical and molecular teratology 2009
Control Selection Options for Genome-Wide Association Studies in Cohorts: Figure 1
S Wacholder, M Rotunno
Cancer epidemiology, biomarkers & prevention 2009
Systems-based candidate genes for human response to influenza infection
L Zhang, JM Katz, M Gwinn, NF Dowling, MJ Khoury
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2009
The Scientific Foundation for Personal Genomics: Recommendations from a National Institutes of Health–Centers for Disease Control and Prevention Multidisciplinary Workshop
Khoury MJ, McBride CM, Schully SD, Ioannidis JP, Feero WG, Janssens AC, Gwinn M, Simons-Morton DG, Bernhardt JM, Cargill M, Chanock SJ, Church GM, Coates RJ, Collins FS, Croyle RT, Davis BR, Downing GJ, DuRoss A, Friedman S, Gail MH, Ginsburg GS, Green RC, Greene MH, Greenland P, Gulcher JR, Hsu A, Hudson KL, Kardia SL, Kimmel PL, Lauer MS, Miller AM, Offit K, Ransohoff DF, Roberts JS, Rasooly RS, Stefansson K, Terry SF, Teutsch SM, Trepanier A, Wanke KL, Witte JS, Xu J
Genetics in Medicine 2009
Validating, augmenting and refining genome-wide association signals
Ioannidis JP, Thomas G, Daly MJ
Nature reviews. Genetics 2009
The genomic applications in practice and prevention network.
Khoury MJ, Feero WG, Reyes M, Citrin T, Freedman A, Leonard D, Burke W, Coates R, Croyle RT, Edwards K, Kardia S, McBride C, Manolio T, Randhawa G, Rasooly R, St Pierre J, Terry S
Genetics in Medicine 2009
Gene ontology analysis of GWA study data sets provides insights into the biology of bipolar disorder.
Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM, Sklar P, Owen MJ, O'Donovan MC, Craddock N
The American Journal of Human Genetics 2009
Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.
Purcell SM, Wray NR, Stone JL, Visscher PM, O'Donovan MC, Sullivan PF, Sklar P
Nature 2009
The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine.
Biesecker LG, Mullikin JC, Facio FM, Turner C, Cherukuri PF, Blakesley RW, Bouffard GG, Chines PS, Cruz P, Hansen NF, Teer JK, Maskeri B, Young AC, Manolio TA, Wilson AF, Finkel T, Hwang P, Arai A, Remaley AT, Sachdev V, Shamburek R, Cannon RO, Green ED
Genome research 2009
A Genome Wide Survey of SNP Variation Reveals the Genetic Structure of Sheep Breeds
Kijas JW, Townley D, Dalrymple BP, Heaton MP, Maddox JF, McGrath A, Wilson P, Ingersoll RG, McCulloch R, McWilliam S, Tang D, McEwan J, Cockett N, Oddy VH, Nicholas FW, Raadsma H
PloS one 2009
Biomarker Validation for Aging: Lessons from mtDNA Heteroplasmy Analyses in Early Cancer Detection
Barker PE, Murthy M
Biomarker insights 2009
Policy perspectives on the emerging pathways of personalized medicine
Downing GJ
Dialogues in clinical neuroscience 2009
Cohort studies and the genetics of complex disease.
Manolio TA
Nature Genetics 2009
Beyond odds ratios--communicating disease risk based on genetic profiles.
Kraft P, Wacholder S, Cornelis MC, Hu FB, Hayes RB, Thomas G, Hoover R, Hunter DJ, Chanock S
Nature reviews. Genetics 2009
Evaluation of genetic tests for susceptibility to common complex diseases: why, when and how?
Wright CF, Kroese M
Human Genetics 2009
Advanced gastric cancer: is laparoscopic gastrectomy safe?
Liakakos T, Misiakos EP, Macheras A
Surgical Endoscopy 2009
The genetics of reading disability.
Petryshen TL, Pauls DL
Current Psychiatry Reports 2009
Update in endocrine autoimmunity
MS Anderson
The Journal of clinical endocrinology and metabolism 2008
Common variants at 30 loci contribute to polygenic dyslipidemia
S Kathiresan, CJ Willer, GM Peloso, S Demissie, K Musunuru, EE Schadt, L Kaplan, D Bennett, Y Li, T Tanaka, BF Voight, LL Bonnycastle, AU Jackson, G Crawford, A Surti, C Guiducci, NP Burtt, S Parish, R Clarke, D Zelenika, KA Kubalanza, MA Morken, LJ Scott, HM Stringham, P Galan, AJ Swift, J Kuusisto, RN Bergman, J Sundvall, M Laakso, L Ferrucci, P Scheet, S Sanna, M Uda, Q Yang, KL Lunetta, J Dupuis, PI de Bakker, CJ O'Donnell, JC Chambers, JS Kooner, S Hercberg, P Meneton, EG Lakatta, A Scuteri, D Schlessinger, J Tuomilehto, FS Collins, L Groop, D Altshuler, R Collins, GM Lathrop, O Melander, V Salomaa, L Peltonen, M Orho-Melander, JM Ordovas, M Boehnke, GR Abecasis, KL Mohlke, LA Cupples
Nature Genetics 2008
Cardiovascular genomics, personalized medicine, and the National Heart, Lung, and Blood Institute: part I: the beginning of an era
CJ O'Donnell, EG Nabel
Circulation. Cardiovascular genetics 2008
Genetic architecture of complex traits: large phenotypic effects and pervasive epistasis
H Shao, LC Burrage, DS Sinasac, AE Hill, SR Ernest, W O'Brien, HW Courtland, KJ Jepsen, A Kirby, EJ Kulbokas, MJ Daly, KW Broman, ES Lander, JH Nadeau
Proceedings of the National Academy of Sciences 2008
Obesity genes: so close and yet so far
D Pomp, KL Mohlke
Journal of biology 2008
Invited commentary: from genome-wide association studies to gene-environment-wide interaction studies--challenges and opportunities
MJ Khoury, S Wacholder
American Journal of Epidemiology 2008
Intermediacy and gene-environment interaction: the example of CHRNA5-A3 region, smoking, nicotine dependence, and lung cancer
S Wacholder, N Chatterjee, N Caporaso
Journal of the National Cancer Institute 2008
Tilting at quixotic trait loci (QTL): an evolutionary perspective on genetic causation
KM Weiss
Genetics 2008
Comprehensive resequence analysis of a 136 kb region of human chromosome 8q24 associated with prostate and colon cancers
M Yeager, N Xiao, RB Hayes, P Bouffard, B Desany, L Burdett, N Orr, C Matthews, L Qi, A Crenshaw, Z Markovic, KM Fredrikson, KB Jacobs, L Amundadottir, TP Jarvie, DJ Hunter, R Hoover, G Thomas, TT Harkins, SJ Chanock
Human Genetics 2008
Gene-wide analyses of genome-wide association data sets: evidence for multiple common risk alleles for schizophrenia and bipolar disorder and for overlap in genetic risk
V Moskvina, N Craddock, P Holmans, I Nikolov, JS Pahwa, E Green, MJ Owen, MC O'Donovan
Molecular Psychiatry 2008
Statistical issues in the analysis of DNA Copy Number Variations
NE Wineinger, RE Kennedy, SW Erickson, MK Wojczynski, CE Bruder, HK Tiwari
International Journal of Computational Biology and Drug Design 2008
Public Health Genomics Approach to Type 2 Diabetes
MJ Khoury, R Valdez, A Albright
Diabetes 2008
Role of MicroRNA in Pancreatic  -Cells: Where More Is Less
MD Walker
Diabetes 2008
Promoting Regulatory Gene Variation in Sodium Reabsorption
PA Doris
Hypertension 2008
Gene Prospector: An evidence gateway for evaluating potential susceptibility genes and interacting risk factors for human diseases
W Yu, A Wulf, T Liu, MJ Khoury, M Gwinn
BMC bioinformatics 2008
Management of High-Throughput DNA Sequencing Projects: Alpheus.
Miller NA, Kingsmore SF, Farmer A, Langley RJ, Mudge J, Crow JA, Gonzalez AJ, Schilkey FD, Kim RJ, van Velkinburgh J, May GD, Black CF, Myers MK, Utsey JP, Frost NS, Sugarbaker DJ, Bueno R, Gullans SR, Baxter SM, Day SW, Retzel EF
Journal of computer science and systems biology 2008
Is the time right for translation research in genomics?
Janssens AC
European Journal of Epidemiology 2008
Meta-analysis of 32 genome-wide linkage studies of schizophrenia
Ng M, Levinson D, Faraone S, Suarez B, DeLisi L, Arinami T, Riley B, Paunio T, Pulver A, Irmansyah, Holmans P, Escamilla M, Wildenauer D, Williams N, Laurent C, Mowry B, Brzustowicz L, Maziade M, Sklar P, Garver D, Abecasis G, Lerer B, Fallin M, Gurling H, Gejman P, Lindholm E, Moises H, Byerley W, Wijsman E, Forabosco P, Tsuang M, Hwu HG, Okazaki Y, Kendler K, Wormley B, Fanous A, Walsh D, O\u2019Neill F, Peltonen L, Nestadt G, Lasseter V, Liang K, Papadimitriou G, Dikeos D, Schwab S, Owen M, O\u2019Donovan M, Norton N, Hare E, Raventos H, Nicolini H, Albus M, Maier W, Nimgaonkar V, Terenius L, Mallet J, Jay M, Godard S, Nertney D, Alexander M, Crowe R, Silverman J, Bassett A, Roy MA, Mérette C, Pato C, Pato M, Roos JL, Kohn Y, Amann-Zalcenstein D, Kalsi G, McQuillin A, Curtis D, Brynjolfson J, Sigmundsson T, Petursson H, Sanders A, Duan J, Jazin E, Myles-Worsley M, Karayiorgou M, Lewis C
Molecular Psychiatry 2008
Current Protocols in Neuroscience
CR Gerfen, A Holmes, D Sibley, P Skolnick, S Wray
Current Protocols in Neuroscience 2001

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