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Multidimensional single-cell analysis identifies a role for CD2-CD58 interactions in clinical antitumor T cell responses
Gabrielle Romain, … , Sattva S. Neelapu, Navin Varadarajan
Gabrielle Romain, … , Sattva S. Neelapu, Navin Varadarajan
Published July 26, 2022
Citation Information: J Clin Invest. 2022;132(17):e159402. https://doi.org/10.1172/JCI159402.
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Research Article Immunology Oncology Article has an altmetric score of 103

Multidimensional single-cell analysis identifies a role for CD2-CD58 interactions in clinical antitumor T cell responses

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Abstract

The in vivo persistence of adoptively transferred T cells is predictive of antitumor response. Identifying functional properties of infused T cells that lead to in vivo persistence and tumor eradication has remained elusive. We profiled CD19-specific chimeric antigen receptor (CAR) T cells as the infusion products used to treat large B cell lymphomas using high-throughput single-cell technologies based on time-lapse imaging microscopy in nanowell grids (TIMING), which integrates killing, cytokine secretion, and transcriptional profiling. Our results show that the directional migration of CD19-specific CAR T cells is correlated with multifunctionality. We showed that CD2 on T cells is associated with directional migration and that the interaction between CD2 on T cells and CD58 on lymphoma cells accelerates killing and serial killing. Consistent with this, we observed that elevated CD58 expression on pretreatment tumor samples in patients with relapsed or refractory large B cell lymphomas treated with CD19-specific CAR T cell therapy was associated with complete clinical response and survival. These results highlight the importance of studying dynamic T cell–tumor cell interactions in identifying optimal antitumor responses.

Authors

Gabrielle Romain, Paolo Strati, Ali Rezvan, Mohsen Fathi, Irfan N. Bandey, Jay R T. Adolacion, Darren Heeke, Ivan Liadi, Mario L. Marques-Piubelli, Luisa M. Solis, Ankit Mahendra, Francisco Vega, Laurence J.N. Cooper, Harjeet Singh, Mike Mattie, Adrian Bot, Sattva S. Neelapu, Navin Varadarajan

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Figure 1

Dynamic single-cell profiling of the multifunctionality of CAR T cell IPs.

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Dynamic single-cell profiling of the multifunctionality of CAR T cell IP...
(A) Schematic overview of the dynamic profiling and image analysis workflow of CAR T cell multifunctionality using TIMING. We evaluated the interaction between CAR T cells and NALM-6 cells as tumor cells on arrays of nanowells using TIMING. (B) A representative example of a multifunctional 19-28z T cell that participated in killing and secreted IFN-γ. TIMING is utilized to quantify T cell–intrinsic behavior such as directional migration and the kinetics of the interaction, leading to induction of apoptosis within tumor cells. After the TIMING assay, the IFN-γ molecules captured onto the beads during TIMING are revealed by using appropriate fluorescently labeled antibodies. Time is displayed as hours and minutes. Scale bar: 20 μm. (C) Schematic description of kinetic parameters measured in TIMING experiments. tSeek, time taken for the effector cell to conjugate to the tumor cell. (D and G) Cumulative contact duration between effector and tumor cells leading to different functional outcomes. Effector cells that only secrete IFN-γ (monofunctional) exhibited longer contact duration compared with cytolytic cells with or without IFN-γ secretion. Data are aggregated from profiling all 5 IPs. HD, healthy donor. (E and H) Comparative assessments of tContact and tDeath for all killer 19-28z T cells. (F and I) Out-of-contact migration of the different functional subsets of 19-28z T cells. All data in D–F correspond to E:T of 1:1 and are aggregated from profiling all 5 IPs (1589 T cells). All data in G–I correspond to an E:T of 1:2–5 (to evaluate serial killing) (1178 T cells). Each violin plot represents a minimum of 80 single cells. All P values for all multiple comparisons were computed using Kruskal-Wallis nonparametric tests and pairwise comparisons using a Mann-Whitney U test. Black bars represent the median, and the dotted lines denote quartiles.

Copyright © 2025 American Society for Clinical Investigation
ISSN: 0021-9738 (print), 1558-8238 (online)

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