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Commentary Free access | 10.1172/JCI134696
1Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
2Department of Medicine and
3Department of Pharmacology, School of Medicine, UCSD, La Jolla, California, USA.
4Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Address correspondence to: Justin B. Echouffo-Tcheugui, Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins School of Medicine, 5501 Hopkins Bayview Circle, Baltimore, Maryland 21204, USA. Phone: 410.550.3054; Email: jechouf1@jhmi.edu.
Find articles by Echouffo-Tcheugui, J. in: JCI | PubMed | Google Scholar |
1Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
2Department of Medicine and
3Department of Pharmacology, School of Medicine, UCSD, La Jolla, California, USA.
4Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Address correspondence to: Justin B. Echouffo-Tcheugui, Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins School of Medicine, 5501 Hopkins Bayview Circle, Baltimore, Maryland 21204, USA. Phone: 410.550.3054; Email: jechouf1@jhmi.edu.
Find articles by Jain, M. in: JCI | PubMed | Google Scholar
1Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
2Department of Medicine and
3Department of Pharmacology, School of Medicine, UCSD, La Jolla, California, USA.
4Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Address correspondence to: Justin B. Echouffo-Tcheugui, Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins School of Medicine, 5501 Hopkins Bayview Circle, Baltimore, Maryland 21204, USA. Phone: 410.550.3054; Email: jechouf1@jhmi.edu.
Find articles by Cheng, S. in: JCI | PubMed | Google Scholar
Published January 27, 2020 - More info
BACKGROUND Ceramides are sphingolipids that play causative roles in diabetes and heart disease, with their serum levels measured clinically as biomarkers of cardiovascular disease (CVD).METHODS We performed targeted lipidomics on serum samples from individuals with familial coronary artery disease (CAD) (n = 462) and population-based controls (n = 212) to explore the relationship between serum sphingolipids and CAD, using unbiased machine learning to identify sphingolipid species positively associated with CAD.RESULTS Nearly every sphingolipid measured (n = 30 of 32) was significantly elevated in subjects with CAD compared with measurements in population controls. We generated a novel sphingolipid-inclusive CAD risk score, termed SIC, that demarcates patients with CAD independently and more effectively than conventional clinical CVD biomarkers including serum LDL cholesterol and triglycerides. This new metric comprises several minor lipids that likely serve as measures of flux through the ceramide biosynthesis pathway rather than the abundant deleterious ceramide species that are included in other ceramide-based scores.CONCLUSION This study validates serum ceramides as candidate biomarkers of CVD and suggests that comprehensive sphingolipid panels should be considered as measures of CVD.FUNDING The NIH (DK112826, DK108833, DK115824, DK116888, and DK116450); the Juvenile Diabetes Research Foundation (JDRF 3-SRA-2019-768-A-B); the American Diabetes Association; the American Heart Association; the Margolis Foundation; the National Cancer Institute, NIH (5R00CA218694-03); and the Huntsman Cancer Institute Cancer Center Support Grant (P30CA040214).
Annelise M. Poss, J. Alan Maschek, James E. Cox, Benedikt J. Hauner, Paul N. Hopkins, Steven C. Hunt, William L. Holland, Scott A. Summers, Mary C. Playdon
The human lipidome comprises over tens of thousands of distinct lipid species in addition to total cholesterol and the other conventional lipid traits that are routinely measurable in the peripheral circulation. Of the lipid species considered to exhibit bioactive functions, sphingolipids are a class of molecules that have shown relevance to human disease risk and cardiovascular outcomes in particular. In this issue of the JCI, Poss et al. conducted targeted lipidomics in a case-control study involving over 600 individuals and found a sphingolipid profile that predicted coronary artery disease status. In the context of emerging evidence linking sphingolipid biology with cardiovascular pathophysiology, these results suggest the potential utility of serum sphingolipids as cholesterol-independent markers of risk and even future targets for optimizing cardiovascular health.
The human lipidome comprises over tens of thousands of distinct lipid species, many of which have primarily structural or energetic functions and others of which play a variety of roles in cellular regulatory pathways (1). The latter lipids, which regulate responses to a diversity of specific stimuli, are termed bioactive lipids. Sphingolipids are a family of bioactive lipids that have emerged as molecules of special interest (Figure 1). Distinguished biochemically by the presence of a sphingoid base, sphingolipids were originally named in the early 20th century after the mythical Sphinx creature, given their enigmatic nature (1). Now, sphingolipids are recognized to be involved in a wide range of functions including, but not limited to, the regulation of cell-cell interactions, cellular growth, migration, apoptosis, senescence, and inflammatory responses. In turn, as key participants of all major cell signaling pathways, sphingolipids and their metabolism have also been implicated in the risk for developing a variety of human diseases including neurodegenerative, metabolic, oncologic, immunologic, and cardiovascular disease conditions.
Bioactive lipids and cardiovascular risk. The human lipidome includes thousands of bioactive lipids, of which sphingolipids represent a class with particular relevance to the balance between cardiovascular health and disease.
The links between sphingolipids, including the ceramide family of lipids, and cardiovascular disease traits have garnered particular attention. Prior human studies have found higher plasma ceramide levels and lower sphingosine-1-phosphate levels in patients with unstable angina or myocardial infarction, as well as in the setting of hypertension and type 2 diabetes (2). Although the biology underlying these observations remains unclear, mechanistic studies have implicated ceramides in atherosclerotic processes (3), such as lipoprotein aggregation, uptake of lipoproteins and accumulation of cholesterol within macrophages, regulation of nitric oxide synthesis, production of superoxide anions, and expression of various cytokines (4). In addition, sphingosine-1-phosphate has been shown to regulate vasoconstriction and vasodilation, sodium excretion in the renal medulla, and pancreatic β cell production of insulin (2, 5). In this context, a number of clinical studies have explored the extent to which sphingolipids might account for the residual risk not explained by conventional lipid traits and subfractions (i.e., total cholesterol, LDL cholesterol, and HDL cholesterol) in models predicting outcomes such as coronary artery disease (CAD) (6). Certain ceramides, in particular, have been shown to offer incremental predictive value over the routinely used lipid markers and other conventional risk markers for CAD (7–9).
Extending their research from prior work, Poss et al. (10) report in this issue of the JCI intriguing results from a case-control study of sphingolipids and CAD. The investigators used a targeted liquid chromatography mass spectrometry method to examine a panel of 32 sphingolipids in relation to CAD in a single-center study of 462 patients and 212 population-based control subjects. Of the sphingolipids measured, 30 were significantly elevated in patients with CAD compared with controls. Sphingosine, dihydro-cer(d18:0/16:0), dihydro-cer(d18:0/18:0), and cer(d18:1/24:1) were most strongly associated with CAD in adjusted models, with ORs for CAD at least twice those for LDL cholesterol (11). The investigators then generated a sphingolipid-inclusive CAD (SIC) risk score, which included all the sphingolipids observed in relation to CAD and appeared to estimate CAD status independently and more effectively than conventional risk factors (including total cholesterol, LDL cholesterol, and HDL cholesterol, as well as serum triglycerides). The SIC risk score also performed better at predicting CAD than did a previously defined and exclusively ceramide-based risk score, the cardiac event risk test 1 (CERT1). In these analyses, the incremental predictive value of the SIC score was strong and significant according to the C-statistic, net reclassification index, and integrated discrimination improvement metrics.
The finding that certain low-abundance, rather than other high-abundance, ceramides appeared important for determining CAD risk is a key observation. As the authors point out, some of the more abundant but less predictive ceramides are known to drive tissue and metabolic function. Similar to the phenomenon of housekeeping genes, more-abundant bioactive lipids may be required for maintaining basic cellular processes; thus, although potentially essential for function, circulating levels of these more-abundant lipids are less likely to inform or distinguish disease states. By contrast, certain less-abundant lipid species may represent more dynamic processes that vary between individuals in ways that ultimately drive clinically relevant pathophysiology. Poss et al. (10) surmise that such processes could involve relative metabolic flux in the levels of precursor and product species, even though ratiometric findings failed to emerge from their analyses. It is possible that potentially important ratiometric patterns are not discernible from peripherally circulating, less tissue-specific measures of sphingolipids — or that more sensitive methods are needed to detect a wider range of less-abundant species to provide more granular information.
Another noteworthy aspect of the report by Poss et al. (10) is the study design. Analyses were limited to a single-center, case-control analysis performed on a fairly homogenous cohort of adults living among the predominantly Mormon community of Utah, without any external validation. Nonetheless, the relatively younger age of CAD onset among the patients provides a potentially greater specificity of results, and the total number of cases with 2:1 matching of controls offered adequate power to detect associations. Moreover, the authors elected to apply two complementary and advanced statistical methods: least absolute shrinkage and selection operator (LASSO) regression and random forest analysis (RFA). This approach to data analyses allowed both a sparse method for analyzing multiple potential predictor sphingolipids at once and a method for not assuming linearity of associations between the predictors and the outcome. In effect, although LASSO models may not perform well for multiple putative predictor molecules that could be highly intercorrelated, RFA models are not as susceptible to this issue; in turn, although RFA models are less efficient if associations are truly linear, LASSO models will optimally accommodate for such linearity (12). It should be noted, however, that these two methods are not the only nontraditional or machine-learning methods that can be applied to these types of high-dimensional data, for which ensemble approaches could be considered in the future.
With regard to the prospect of translating discovery in bioactive lipids to an application for clinical practice, this report by Poss et al. offers a step forward (10). Compared with the CERT1 ceramide plasma test, commercially released in 2016 by the Mayo Medical Laboratories for evaluation of cardiac risk (13), the broader SIC risk score captures a wider scope of potentially variable sphingolipid biology (7–9, 13) and performs better in the index cohort described in the study by Poss et al. However, further work is needed to validate the ability of the same or a similar set of biomarkers to perform in prospective analyses and in populations more diverse, across a number of characteristics including age, sex, race/ethnicity, and comorbid status (14). Future investigations could also consider expanding the reach of profiling methods to detect a more complete range of low-abundance sphingolipids including more species potentially associated with protection rather than harm, especially if we believe that biological flux in sphingolipid metabolism is relevant. Most important, from a clinical perspective, the efficacy and cost-effectiveness of directing interventions on the basis of any type of sphingolipid risk score remain unknown. Nonetheless, although there is still much to learn about sphingolipid biology and its role in modulating cardiovascular risk, the study by Poss et al. (10) augments an expanding body of evidence pointing to the sphingolipids as bioactive lipid molecules of relevance to the balance of human health and disease.
This work was supported in part by grants from the NIH (R01-HL134168 and R01-HL143227, to SC and MJ); the American Heart Association (CVGPS Pathway Award, to SC and MJ); and the Doris Duke Charitable Foundation (to MJ and SC).
Address correspondence to: Justin B. Echouffo-Tcheugui, Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Johns Hopkins School of Medicine, 5501 Hopkins Bayview Circle, Baltimore, Maryland 21204, USA. Phone: 410.550.3054; Email: jechouf1@jhmi.edu.
Conflict of interest: SC reports receiving consulting fees from Zogenix.
Copyright: © 2020, American Society for Clinical Investigation.
Reference information: J Clin Invest. 2020;130(3):1084–1086. https://doi.org/10.1172/JCI134696.
See the related article at Machine learning reveals serum sphingolipids as cholesterol-independent biomarkers of coronary artery disease.