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Epithelial miR-141 regulates IL-13–induced airway mucus production
Sana Siddiqui, Kristina Johansson, Alex Joo, Luke R. Bonser, Kyung Duk Koh, Olivier Le Tonqueze, Samaneh Bolourchi, Rodriel A. Bautista, Lorna Zlock, Theodore L. Roth, Alexander Marson, Nirav R. Bhakta, K. Mark Ansel, Walter E. Finkbeiner, David J. Erle, Prescott G. Woodruff
Sana Siddiqui, Kristina Johansson, Alex Joo, Luke R. Bonser, Kyung Duk Koh, Olivier Le Tonqueze, Samaneh Bolourchi, Rodriel A. Bautista, Lorna Zlock, Theodore L. Roth, Alexander Marson, Nirav R. Bhakta, K. Mark Ansel, Walter E. Finkbeiner, David J. Erle, Prescott G. Woodruff
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Research Article Pulmonology

Epithelial miR-141 regulates IL-13–induced airway mucus production

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Abstract

IL-13–induced goblet cell metaplasia contributes to airway remodeling and pathological mucus hypersecretion in asthma. miRNAs are potent modulators of cellular responses, but their role in mucus regulation is largely unexplored. We hypothesized that airway epithelial miRNAs play roles in IL-13–induced mucus regulation. miR-141 is highly expressed in human and mouse airway epithelium, is altered in bronchial brushings from asthmatic subjects at baseline, and is induced shortly after airway allergen exposure. We established a CRISPR/Cas9-based protocol to target miR-141 in primary human bronchial epithelial cells that were differentiated at air-liquid-interface, and goblet cell hyperplasia was induced by IL-13 stimulation. miR-141 disruption resulted in decreased goblet cell frequency, intracellular MUC5AC, and total secreted mucus. These effects correlated with a reduction in a goblet cell gene expression signature and enrichment of a basal cell gene expression signature defined by single cell RNA sequencing. Furthermore, intranasal administration of a sequence-specific mmu-miR-141-3p inhibitor in mice decreased Aspergillus-induced secreted mucus and mucus-producing cells in the lung and reduced airway hyperresponsiveness without affecting cellular inflammation. In conclusion, we have identified a miRNA that regulates pathological airway mucus production and is amenable to therapeutic manipulation through an inhaled route.

Authors

Sana Siddiqui, Kristina Johansson, Alex Joo, Luke R. Bonser, Kyung Duk Koh, Olivier Le Tonqueze, Samaneh Bolourchi, Rodriel A. Bautista, Lorna Zlock, Theodore L. Roth, Alexander Marson, Nirav R. Bhakta, K. Mark Ansel, Walter E. Finkbeiner, David J. Erle, Prescott G. Woodruff

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Figure 4

miR-141 repression in gene-edited airway epithelial cells is associated with a reduction in mucus-producing goblet cell numbers.

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miR-141 repression in gene-edited airway epithelial cells is associated ...
(A) Flow cytometry gating strategy of acetylated α-tubulin+NGFR– (red gate, ciliated cells), acetylated α-tubulin–NGFR+ (blue gate, basal cells), acetylated α-tubulin–NGFR–CEACAM6+TSPAN8+ (green gate, secretory cells), and acetylated α-tubulin–NGFR–CEACAM6+TSPAN8+MUC5AC+ (light green gate, MUC5AC+ secretory cells) cells. (B) Frequency of acetylated α-tubulin–NGFR–CEACAM6+TSPAN8+ secretory cells (% of all cells, n = 4/group) in human bronchial epithelial cell (HBEC) cultures that have undergone gene editing with nontargeting (NT) or MIR141-targeting gRNAs, subsequently grown at air-liquid-interface (ALI) with IL-13 stimulation (2-tailed paired t test). (C) Representative contour plots demonstrating CEACAM6+TSPAN8+ secretory cells in ALI cultures of untreated (UT, left) or IL-13–stimulated (right) HBECs after gene editing with NT or MIR141 gRNAs. (D) Frequency of ciliated cells (red), basal cells (blue), TSPAN8– secretory cells (black), and TSPAN8+ secretory cells (green) (% of all cells, n = 4/group) in ALI-cultured NT or MIR141-targeted HBECs with (IL-13) or without (UT) IL-13 (2-tailed paired t test). (E) Hsa-miR-141-3p expression fold difference assessed by TaqMan qPCR in FAC-sorted ciliated cells (SiR-tubulin+NGFR–), basal cells (SiR-tubulin–NGFR+), and TSPAN8– secretory cells compared with IL-13–inducible TSPAN8+ secretory cells (1-way ANOVA followed by Dunnett’s test; *P < 0.05, **P < 0.01). (F) Hsa-miR-141-3p expression levels assessed by TaqMan qPCR in relation to frequency of red, blue, green, or light green cell gates (as in A). rP, Pearson correlation coefficient.

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