[HTML][HTML] Defining Emerging Roles for NF-κB in Antivirus Responses: Revisiting the Interferon-β Enhanceosome Paradigm

S Balachandran, AA Beg - PLoS pathogens, 2011 - journals.plos.org
PLoS pathogens, 2011journals.plos.org
Classic studies over the last two decades have made virus-induced activation of the
mammalian interferon-b (ifnb) gene a prototype of eukaryotic gene regulation [1–6]. Indeed,
the compact, 50 base-pair enhancer region upstream of the ifnb transcription start site is
amongst the beststudied stretches of mammalian DNA, and its function in regulation of ifnb
expression is considered a paradigm of stimulusactivated mammalian gene regulation. In a
widely accepted model, RNA virus infection of most cell types triggers the activation of three …
Classic studies over the last two decades have made virus-induced activation of the mammalian interferon-b (ifnb) gene a prototype of eukaryotic gene regulation [1–6]. Indeed, the compact, 50 base-pair enhancer region upstream of the ifnb transcription start site is amongst the beststudied stretches of mammalian DNA, and its function in regulation of ifnb expression is considered a paradigm of stimulusactivated mammalian gene regulation. In a widely accepted model, RNA virus infection of most cell types triggers the activation of three classes of transcription factor—interferon regulatory factors (IRFs)-3/7, NF-kB, and ATF-2/c-Jun—downstream of the RIG-I-like receptor (RLR) family of viral RNA sensors [7–9]. These transcription factors bind welldefined adjacent sites in the ifnb enhancer to nucleate formation of an ‘‘enhanceosome’’. The nascent enhanceosome then recruits chromatin-modifying enzymes and general transcription factors to initiate transcription of ifnb and launch the type I IFN antiviral innate immune response [1, 2, 10]. Implicit in the inherently cooperative nature of enhanceosome formation is the supposition that IRFs-3/7, NF-kB, and ATF-2/c-Jun are all perhaps equally necessary for virus-driven ifnb expression. Recent findings from our laboratories and other groups, however, suggest an alternate view of NF-kB function in antivirus responses: that NF-kB is indeed required for ifnb expression, but only before (and very early after) infection. As the infection unfolds, NF-kB is no longer necessary for ifnb induction, and instead takes on a more general role in the expression of non-IFN innate immune and pro-inflammatory genes; meanwhile, IRFs-3/7 inherit ifnb expression to propel the type I IFN antiviral system. In this article, we update the enhanceosome paradigm by proposing temporally distinct functions for NF-kB in the RLR-triggered innate immune response.
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