A mechanism for Ikaros regulation of human globin gene switching

JR Keys, MR Tallack, Y Zhan… - British journal of …, 2008 - Wiley Online Library
JR Keys, MR Tallack, Y Zhan, P Papathanasiou, CC Goodnow, KM Gaensler, M Crossley
British journal of haematology, 2008Wiley Online Library
The human β globin locus consists of an upstream LCR and functional genes arranged
sequentially in the order of their expression during development: 5′‐HBE1, HBG2, HBG1,
HBD, HBB‐3′. Haemoglobin switching entails the successive recruitment of these genes
into an active chromatin hub (ACH). Here we show that the transcription factor Ikaros plays a
major role in the formation of the β‐globin ACH, and in haemoglobin switching. In Plastic
mice, where the DNA‐binding region of Ikaros is disrupted by a point mutation, there is …
Summary
The human β globin locus consists of an upstream LCR and functional genes arranged sequentially in the order of their expression during development: 5′‐HBE1, HBG2, HBG1, HBD, HBB‐3′. Haemoglobin switching entails the successive recruitment of these genes into an active chromatin hub (ACH). Here we show that the transcription factor Ikaros plays a major role in the formation of the β‐globin ACH, and in haemoglobin switching. In Plastic mice, where the DNA‐binding region of Ikaros is disrupted by a point mutation, there is concomitant marked down‐regulation of HBB, and up‐regulation of HBG expression. We show for the first time Ikaros and its family member Eos, bind to critical cis elements implicated in haemoglobin switching and deletional hereditary persistence of fetal haemoglobin (HPFH). Chromatin conformation capture (3C) data demonstrated that Ikaros facilitates long‐distance DNA looping between the LCR and a region upstream of HBD. This study provides new insights into the mechanism of stage‐specific assembly of the β‐globin ACH, and HPFH.
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