Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patients

A Gros, MR Parkhurst, E Tran, A Pasetto, PF Robbins… - Nature medicine, 2016 - nature.com
A Gros, MR Parkhurst, E Tran, A Pasetto, PF Robbins, S Ilyas, TD Prickett, JJ Gartner…
Nature medicine, 2016nature.com
Detection of lymphocytes that target tumor-specific mutant neoantigens—derived from
products encoded by mutated genes in the tumor—is mostly limited to tumor-resident
lymphocytes,, but whether these lymphocytes often occur in the circulation is unclear. We
recently reported that intratumoral expression of the programmed cell death 1 (PD-1)
receptor can guide the identification of the patient-specific repertoire of tumor-reactive CD8+
lymphocytes that reside in the tumor. In view of these findings, we investigated whether PD-1 …
Abstract
Detection of lymphocytes that target tumor-specific mutant neoantigens—derived from products encoded by mutated genes in the tumor—is mostly limited to tumor-resident lymphocytes,, but whether these lymphocytes often occur in the circulation is unclear. We recently reported that intratumoral expression of the programmed cell death 1 (PD-1) receptor can guide the identification of the patient-specific repertoire of tumor-reactive CD8+ lymphocytes that reside in the tumor. In view of these findings, we investigated whether PD-1 expression on peripheral blood lymphocytes could be used as a biomarker to detect T cells that target neoantigens. By using a high-throughput personalized screening approach, we identified neoantigen-specific lymphocytes in the peripheral blood of three of four melanoma patients. Despite their low frequency in the circulation, we found that CD8+PD-1+, but not CD8+PD-1, cell populations had lymphocytes that targeted 3, 3 and 1 unique, patient-specific neoantigens, respectively. We show that neoantigen-specific T cells and gene-engineered lymphocytes expressing neoantigen-specific T cell receptors (TCRs) isolated from peripheral blood recognized autologous tumors. Notably, the tumor-antigen specificities and TCR repertoires of the circulating and tumor-infiltrating CD8+PD-1+ cells appeared similar, implying that the circulating CD8+PD-1+ lymphocytes could provide a window into the tumor-resident antitumor lymphocytes. Thus, expression of PD-1 identifies a diverse and patient-specific antitumor T cell response in peripheral blood, providing a novel noninvasive strategy to develop personalized therapies using neoantigen-reactive lymphocytes or TCRs to treat cancer.
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