Univariate and multivariate family‐based association analysis of the IL‐13 ARG130GLN polymorphism in the Childhood Asthma Management program

DL DeMeo, C Lange, EK Silverman… - … Official Publication of …, 2002 - Wiley Online Library
Genetic Epidemiology: The Official Publication of the …, 2002Wiley Online Library
Abstract Interleukin 13 (IL-13) has been demonstrated to have a crucial role in animal
models of allergy and asthma. In human case-control genetic-association studies, the
Arg130Gln polymorphism has been associated with elevated total serum IgE and an asthma
diagnosis in atopic and nonatopic individuals (Graves et al.[2000] J. Allergy Clin. Immunol.
105: 506–513; Heinzmann et al.[2000] Hum. Mol. Genet. 9: 549–559). To apply family-based
association methods, we obtained DNA samples from 685 asthmatic children from 640 …
Abstract
Interleukin 13 (IL-13) has been demonstrated to have a crucial role in animal models of allergy and asthma. In human case-control genetic-association studies, the Arg130Gln polymorphism has been associated with elevated total serum IgE and an asthma diagnosis in atopic and nonatopic individuals (Graves et al.[2000] J. Allergy Clin. Immunol. 105: 506–513; Heinzmann et al.[2000] Hum. Mol. Genet. 9: 549–559). To apply family-based association methods, we obtained DNA samples from 685 asthmatic children from 640 sibships and their parents in the Childhood Asthma Management Program (CAMP). Six hundred and sixty-six asthmatic children had complete phenotypic information and were used for this analysis. We performed quantitative association analysis using the transmission disequilibrium test (TDT) on 22 individual phenotypes and 5 grouped phenotypes relating to allergy, airway responsiveness, pulmonary function, bronchodilator responsiveness, and asthma severity, using genotypes at the Arg130Gln polymorphism of the IL-13 gene. A positive association was obtained between Arg130Gln and a grouped phenotype of allergy (consisting of the individual phenotypes of eosinophils, IgE, and positive skin tests), using FBAT-GEE, a multivariate extension of the family-based association test (Lange et al.[2002] Biostatistics 1: 1–15). The three phenotypes were then evaluated individually and revealed a significant association between total eosinophil count and the Arg130Gln locus; there was a trend for association between total IgE and the Arg130Gln polymorphism. The Arg130Gln polymorphism is associated with an elevated eosinophil count as well as with a grouped allergy phenotype, in children with mild to moderate asthma. No evidence for association was found between Arg130Gln and airway responsiveness, asthma diagnosis, or asthma severity. Genet. Epidemiol. 23: 335–348, 2002.© 2002 Wiley-Liss, Inc.
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