3D domain swapping: a mechanism for oligomer assembly

MJ Bennett, MP Schlunegger, D Eisenberg - Protein science, 1995 - Wiley Online Library
MJ Bennett, MP Schlunegger, D Eisenberg
Protein science, 1995Wiley Online Library
Abstract 3D domain swapping is a mechanism for forming oligomeric proteins from their
monomers. In 3D domain swapping, one domain of a monomeric protein is replaced by the
same domain from an identical protein chain. The result is an intertwined dimer or higher
oligomer, with one domain of each subunit replaced by the identical domain from another
subunit. The swapped “domain” can be as large as an entire tertiary globular domain, or as
small as an α‐helix or a strand of a β‐sheet. Examples of 3D domain swapping are reviewed …
Abstract
3D domain swapping is a mechanism for forming oligomeric proteins from their monomers. In 3D domain swapping, one domain of a monomeric protein is replaced by the same domain from an identical protein chain. The result is an intertwined dimer or higher oligomer, with one domain of each subunit replaced by the identical domain from another subunit. The swapped “domain” can be as large as an entire tertiary globular domain, or as small as an α‐helix or a strand of a β‐sheet. Examples of 3D domain swapping are reviewed that suggest domain swapping can serve as a mechanism for functional interconversion between monomers and oligomers, and that domain swapping may serve as a mechanism for evolution of some oligomeric proteins. Domain‐swapped proteins present examples of a single protein chain folding into two distinct structures.
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