Polyadenylylation helps regulate mRNA decay in Escherichia coli.

EB O'Hara, JA Chekanova, CA Ingle… - Proceedings of the …, 1995 - National Acad Sciences
EB O'Hara, JA Chekanova, CA Ingle, ZER Kushner, E Peters, SR Kushner
Proceedings of the National Academy of Sciences, 1995National Acad Sciences
As part of our genetic analysis of mRNA decay in Escherichia coli K-12, we examined the
effect of the pcnB gene [encoding poly (A) polymerase I] on message stability. Eliminating
poly (A) polymerase I (delta pcnB) dramatically stabilized the lpp, ompA, and trxA transcripts.
The half-lives of individual mRNAs were increased in both a delta pcnB single mutant and a
delta pcnB pnp-7 rnb-500 rne-1 multiple mutant. We also found mRNA decay intermediates
in delta pcnB mutants that were not detected in control strains. By end-labeling total E. coli …
As part of our genetic analysis of mRNA decay in Escherichia coli K-12, we examined the effect of the pcnB gene [encoding poly(A) polymerase I] on message stability. Eliminating poly(A) polymerase I (delta pcnB) dramatically stabilized the lpp, ompA, and trxA transcripts. The half-lives of individual mRNAs were increased in both a delta pcnB single mutant and a delta pcnB pnp-7 rnb-500 rne-1 multiple mutant. We also found mRNA decay intermediates in delta pcnB mutants that were not detected in control strains. By end-labeling total E. coli RNA with [32P]pCp and T4 RNA ligase and then digesting the RNA with RNase A and T1, we showed that many RNAs in a wild-type strain contained poly(A) tails ranging from 10 nt to > 50 nt long. When polynucleotide phosphorylase, RNase II, and RNase E were absent, the length (> 100 nt) and number (10- to 20-fold) of the poly(A) tails increased. After transcription initiation was stopped with rifampicin, polyadenylylation apparently continued. Deleting the structural gene for poly(A) polymerase I (pcnB) reduced the amount of 3'-terminal poly(A) sequences by > 90%. We propose a model for the role of polyadenylylation in mRNA decay.
National Acad Sciences